| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124851
Identifier: 22124851
GI number: 22124851
Start: 1063849
End: 1065702
Strand: Direct
Name: 22124851
Synonym: y0944
Alternate gene names: NA
Gene position: 1063849-1065702 (Clockwise)
Preceding gene: 22124850
Following gene: 22124852
Centisome position: 23.12
GC content: 45.25
Gene sequence:
>1854_bases ATGGCGGATAAGTCAGTTGAATTAACACCCGTGGTAGAGGCACCAGTTGTGTTTTCATTGCCTTACTTTGAGTTTTTGGT CTGTACCCGGCGTTATGAAGATGCGGGCAGATTATTGATACTGATGTTGGAGAAGCTAGATACTCAATATGGGCGCTGGG ATGTTTTTTCTCTGAATAAACAGCCAATACAGCAACAAGAGTATTATTGTAATCGGCTAGCCGCCGCTATCGGATGCTTA TTTTCTGATCCCGGATTTGTGATTTCGGAAACCGGTTTCCTTCAGCTAATCAACTTCCACCGTTGGATTGCGTTGATTTT TGCAGCATCGACTTTTGGCCATGCCGATCATGTGATCACTAACCTTAATGAAGCCGGAAATGGGTGCTCGCACCCATTGC GATTCGAGCGAAATAACTTCCTTAAATTTTGTGTGATGTATTTACCCGAATCAGGTATTCCGCTGCAACCGGATATATTA TGGCAATTTAATCCGCAGGCAACAGCCGCATTATTTCTGGCGTTATTATCTCCCCGAATTTTACCGAGTGCGGCGGGGCA TGAAAAGCGTGAGACTTTATTAGCGTGGTTACCTGAAAAACTCTTAACACTGATCAGTCTTGAGGGGTTACCTGAGCGTA TTTTGCATGATGTGTATATGCATTGCAGTTATGCCGACATGGCGAAAAAACACACCATAAAGCGGAGTATTAATTTTCAT TTACGTAAAACCATGCTCAAAAATGGATTATCTGATATGAATGAACTGCCACCATTGCGTAGCAAACCATTGATGTTAGT GATTTTAGAGTGGTTTAACAGTGGTCATTCTATCTATCGAACGCACTCCAGTACTCTGCGGGCGGCCCGTGATCAGTTTT CGACTCATGGTGTTGCGATTGCAGAGGCAACAGATGATATTACCCGAAAAGTATTTGATGATTTCACTGAGGTTAGCCGA ACGGGGGCGGTCGAAACGATTATGGCGCTGGCACAACAGTTACGCCCGGATGTCATTTATTTTCCCAGTGTGGGGATGTT CCCGATGACGGTGGCGTTGACTAATTTACGGTTGGCCCCCTTGCAGGTGATGGCGTTAGGCCACCCGGCAACCACCCATT CTGACTATATTGATGCGGTGTTGGTGGAGGAAGACTATTTGGGCGATATCGCATGCTTCTCCGAGAAGGTGGTTTCTTTA CCTAAAGATTGCCTACCTTATGTGCCGCCAGCCAATATCACTCAACCGGAACCCATACAGCAATTTGTTCAGCGCGAAGC GGTACATATTGCCGTTTGTGCTTCAGCGATGAAAATTAACCCTCGTTTTTTAGCTGCCTGTGCCGAAATCGCCTTACGAT CCCCGCTACCTATCATATTTCATTTTCTGGTTGGTTTTTGCTGGGGTATAACTCATAGGGTTATGGAAAAAGCGGTTAAT GAGATGGTGACTTCAGCCAAAGTTTATGAACACTTAAATTATCAGAATTATTTACAGGTAATTAATCAGTGCGATCTGTT TATTAATCCGTTTCCTTTCGGCAATACCAATGGCATCGTCGATACGGTGCGGCAGGGGTTGCCTGGTGTTTGTCTGAGTG GGGAGGAAGTCCATGAGCATATTGATGAAGGGTTATTTCGCCGTCTGGGTTTGGCTGAAGAACTGATTACACATAATGTG GAGCAATATATTACGGCGACGGTACGGTTAATTACGGATACAAACTGGCGCAATGGTCTACGCCGTCAGTTGTTACAAAC TCAACCCGATAATGTGCTGTTTACCGGTAAACCCGAGCAATTCGGGCAGATCGTTCGTGCCTTGCTGGATAACGGCCATC AGGATGTGAATTAG
Upstream 100 bases:
>100_bases AACTCGAATTATTTTGGGTATATTAATTTAATAATATTAACGATACAGCGGGGCTTGGCTAAATAGAGGGTAAGCCCTGA GCTGATAGGGAGATCGGGTA
Downstream 100 bases:
>100_bases TATGCTGAAATGGCAGGCCACAACTGCATGTGAGGATCCCGCGGAGGGGGAAGAACTTCATCGCTTGGTTGCCGATATCC CGATCGGCATTTTACAGCAC
Product: adhesin system protein
Products: NA
Alternate protein names: Adhesin Processing HmwC-Like Protein; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Domain Protein; Adhesin Processing Protein; TPR Repeat-Containing Protein; TPR Domain-Containing Protein; Glycosyltransferase
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKQPIQQQEYYCNRLAAAIGCL FSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDIL WQFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSR TGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSL PKDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNV EQYITATVRLITDTNWRNGLRRQLLQTQPDNVLFTGKPEQFGQIVRALLDNGHQDVN
Sequences:
>Translated_617_residues MADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKQPIQQQEYYCNRLAAAIGCL FSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDIL WQFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSR TGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSL PKDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNV EQYITATVRLITDTNWRNGLRRQLLQTQPDNVLFTGKPEQFGQIVRALLDNGHQDVN >Mature_616_residues ADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKQPIQQQEYYCNRLAAAIGCLF SDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILW QFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFHL RKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSRT GAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLP KDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVNE MVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNVE QYITATVRLITDTNWRNGLRRQLLQTQPDNVLFTGKPEQFGQIVRALLDNGHQDVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69702; Mature: 69571
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNK CCCCCCEECEEECCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCC QPIQQQEYYCNRLAAAIGCLFSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVIT CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILWQFNPQATAALFLALLSPRI CCHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC LPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAI HHHHHHHHCHHHHHHCCCCCCCCHHEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEE AEATDDITRKVFDDFTEVSRTGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAP EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCC LQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLPKDCLPYVPPANITQPEPIQ EEEEEECCCCCCCCHHHHEEEECCHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHH QFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEH HHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH IDEGLFRRLGLAEELITHNVEQYITATVRLITDTNWRNGLRRQLLQTQPDNVLFTGKPEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCEEEECCCHH FGQIVRALLDNGHQDVN HHHHHHHHHHCCCCCCC >Mature Secondary Structure ADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNK CCCCCEECEEECCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCC QPIQQQEYYCNRLAAAIGCLFSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVIT CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILWQFNPQATAALFLALLSPRI CCHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC LPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAI HHHHHHHHCHHHHHHCCCCCCCCHHEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEE AEATDDITRKVFDDFTEVSRTGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAP EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCC LQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLPKDCLPYVPPANITQPEPIQ EEEEEECCCCCCCCHHHHEEEECCHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHH QFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEH HHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH IDEGLFRRLGLAEELITHNVEQYITATVRLITDTNWRNGLRRQLLQTQPDNVLFTGKPEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCEEEECCCHH FGQIVRALLDNGHQDVN HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA