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The map label for this gene is yadS [H]

Identifier: 22124716

GI number: 22124716

Start: 898607

End: 899269

Strand: Reverse

Name: yadS [H]

Synonym: y0803

Alternate gene names: 22124716

Gene position: 899269-898607 (Counterclockwise)

Preceding gene: 22124717

Following gene: 22124715

Centisome position: 19.55

GC content: 50.83

Gene sequence:

>663_bases
GTGCCAACAAATGGCCAGCATTCCAACCCCTGTCGCGGAGTCACATTAATGCTGGTTTATTGGCTGGATATCTTAGGTAC
TGCGGTATTTGCTATCTCTGGTGTATTACTGGCAGGAAAACTACGTATGGATCCATTTGGCGTACTGGTTTTGGGGGTGG
TTACTGCCGTCGGGGGTGGCACGATCCGTGACATGGCATTAGCCAATGGCCCGGTATTTTGGGTGAAAGATCCCACCGAT
CTAGTCGTGGCCATGGTGACCTGTCTGGCTACCATCGTACTGGTACGTCAACCCAGGCGCACGGCAAAATGGATCCTGCC
GGTGTTAGATGCGATTGGTTTAGCGGTGTTCGTCGGTATCGGGGTTAATAAAGCTTTTGCCGCCGATGCCAGCCCATTAG
TGGCTATCTGTATGGGCGTAATAACTGGTGTCGGAGGTGGGATTATTCGTGACGTCTTAGCCCGTGAGATTCCGATGATC
CTGCGTACTGAGATTTATGCGACGGCCTGTATTATTGGCGGGATCGTGCATGCCACTGCGTTCTATACATTTAACATGCC
ATTACAGCAAGCCATGATGTTGGGCATGGTGATAACCCTCGGTATTCGGCTCGCCGCAATCCGTTGGCATTTAAAACTAC
CAACCTTCGAAATAGAGCATTGA

Upstream 100 bases:

>100_bases
CCGCCTTTTGGTTGCCTCAGCTTGTGGTACCTGTTATCGCCCTGAATGAAGACTGGTTTAATCGCGCCAGCCCACGTATC
CTGCTGGCCGCTCAACAGCT

Downstream 100 bases:

>100_bases
GATATTACTGTCGAATAATCATCTTTGAGCATAAAAAACCGCTGCCATTCTCATGGTCGCGGTTTTTTAGCGATGCTTTA
GTTTTAACGATGCTTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPTNGQHSNPCRGVTLMLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTD
LVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMI
LRTEIYATACIIGGIVHATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH

Sequences:

>Translated_220_residues
MPTNGQHSNPCRGVTLMLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTD
LVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMI
LRTEIYATACIIGGIVHATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH
>Mature_219_residues
PTNGQHSNPCRGVTLMLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDL
VVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMIL
RTEIYATACIIGGIVHATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=86.2745098039216, Blast_Score=328, Evalue=2e-91,
Organism=Escherichia coli, GI87082304, Length=152, Percent_Identity=40.1315789473684, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 23462; Mature: 23330

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNGQHSNPCRGVTLMLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
TIRDMALANGPVFWVKDPTDLVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGI
HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH
HHEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCC
>Mature Secondary Structure 
PTNGQHSNPCRGVTLMLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
TIRDMALANGPVFWVKDPTDLVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGI
HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH
HHEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]