| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is erpA [H]
Identifier: 22124714
GI number: 22124714
Start: 897946
End: 898305
Strand: Direct
Name: erpA [H]
Synonym: y0801
Alternate gene names: 22124714
Gene position: 897946-898305 (Clockwise)
Preceding gene: 22124713
Following gene: 22124719
Centisome position: 19.52
GC content: 44.44
Gene sequence:
>360_bases TTGGGAGTGATGAGGATGAGCAACGAAACAGTACTGCCCCTACAGTTTACCGAGGCGGCGGCAAAGAAAGTTAAACTACT GATTTCTGATGAGGAAAACCCGAATCTGAAACTGCGTGTTTACATTACCGGTGGTGGATGTAGCGGGTTCCAATATGGTT TTACTTTTGATGATCAGGTTAATGATGGTGATATGACCATTGAAAAACAAGGTGTTGAGCTGGTTGTTGACCCAATGAGC CTGCAATATTTAGTGGGCGGTGCCGTGGATTATACTGAAGGGCTGGAAGGTTCTCGTTTTATCGTGACTAACCCGAATGC AAAGAGTACTTGTGGGTGTGGTTCTTCTTTCAGTATCTAA
Upstream 100 bases:
>100_bases CTTGAATGAAATACTCAGGTATTAGATAATCGAGCCATAGATCAGGCTGCCAGTGTAGTAACCTGCAACGCGAAGTAGTA ACCTGCAACTCGAACACCGG
Downstream 100 bases:
>100_bases TTTACCCTGCGTCCTTGGCGCTACAGCGGTGTTAGCTGCACTTACTTACCTGAATCACTGACCTGTCGTTGGCTTTATAT AAATAAGCTCATCGGGATTC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MGVMRMSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMS LQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Sequences:
>Translated_119_residues MGVMRMSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMS LQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >Mature_118_residues GVMRMSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMSL QYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=46.9879518072289, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI52426768, Length=115, Percent_Identity=32.1739130434783, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786351, Length=114, Percent_Identity=88.5964912280702, Blast_Score=212, Evalue=6e-57, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=38.1818181818182, Blast_Score=72, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=40.7407407407407, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25146411, Length=112, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=30.8411214953271, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=33.0188679245283, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=109, Percent_Identity=41.2844036697248, Blast_Score=82, Evalue=5e-17, Organism=Drosophila melanogaster, GI24642263, Length=110, Percent_Identity=33.6363636363636, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12844; Mature: 12713
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVMRMSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQV CCCEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCEEECCCC NDGDMTIEKQGVELVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI CCCCEEEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure GVMRMSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQV CCEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCEEECCCC NDGDMTIEKQGVELVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI CCCCEEEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA