| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is fhuD [H]
Identifier: 22124710
GI number: 22124710
Start: 891271
End: 892359
Strand: Direct
Name: fhuD [H]
Synonym: y0797
Alternate gene names: 22124710
Gene position: 891271-892359 (Clockwise)
Preceding gene: 22124709
Following gene: 161484863
Centisome position: 19.37
GC content: 50.41
Gene sequence:
>1089_bases ATGAAGACACATTTACCCATGGATCTCTCTTCTTCATCGGCTTCGAATTATTTATCGGGTCCAGATTGCTCATCGGATCC AGATTGTTCAGTAAGGCCAGCTTGTTCAGCAAGGTCAGATCGTTCAGTAAGGCCAGATCGTTCATCGGGGCCCGATTATT ACCGGCGTCGGCTACTGATGGCATTAACGTTATCGCCATTACTGCTCTCATTGCCCAGTCTGGTAGCGGCGGCACCGAAG AGCGATCAGCCATTACTCAATATAGACAGAGTGATTGATATCCAAAGAGATATCGATACTAAAAGGGTCGTCGCACTGGA GTGGCTACCTGTCGAATTGCTACTGGCATTGGGGGTTACACCGTTTGGTGTCGCTGATATTCATAACTATCGCCTATGGG TTGGGGAGCCTGCTCTGCCGGCGGATGTGATTAATGTCGGTCAGCGCACTGAACCCAATCTGGAATTACTGCAACAAATG GCTCCATCGCTGATCCTGCTGTCGCAGGGTTATGGCCCTTCGCCGGAGAAACTTGCGCCTATCGCGCCCACGATGAGTTT TGCGTTTAATGAACAGGGCAGTTCACCGCTGGCTGTAGGCAAAAACTCATTACAGACATTGGGGCAGCGTTTGGGATTGG AGACGGCTGCGCAACAGCATCTTGCTGATTTTGACCATTTTATGCTGGCAGCCCGTGCGCGTTTATCTGGCGACACGCAG ACTCCGTTATTAATGTTCTCTCTGTTGGATCCCCGCCATGCGTTGATTATCGGTAACGGCAGCCTGTTTCAGGATGTATT GAGCACCTTGAATATTGAGAATGCCTGGCAAGGGGAGACCAATTTTTGGGGCAGCGCGGTGGTGGGTATTGAACGTTTAG CGACGATAAAAACGGCACGTGCAGTGTGTTTCGGCCATGGAAATAATGAGATGTTACAGCAGGTTGCACGTACCCCATTA TGGCAATCGCTGTCTTTTGTACGAGAAAACCAATTACGTCTCTTGCCACCGGTTTGGTTCTACGGCGCGACACTGTCAGC TATGCGTTTCGTTCGTTTACTGGAACAGGCGTGGGGGAAAGCACCATGA
Upstream 100 bases:
>100_bases ATAGCCTGATGCAGAGTGCGGTGTTAGAACAAATTTATGGTATCCCAATGGGTATTTTACCGCACCCGGCTGGCGGTGCG CCGGTAAGTTTTGTTTATTA
Downstream 100 bases:
>100_bases GCGCCATAAGTTTACGCCAGGGTTGGCGGCTCCCTGCGGGTCTACTTGGCCTACTGGTGGTTATTGCCGTTTCCCTGACA TTTTATAACCTCAGTCAATT
Product: iron-hydroxamate transporter substrate-binding subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein D; Ferrichrome-binding periplasmic protein; Iron(III)-hydroxamate-binding protein fhuD [H]
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKTHLPMDLSSSSASNYLSGPDCSSDPDCSVRPACSARSDRSVRPDRSSGPDYYRRRLLMALTLSPLLLSLPSLVAAAPK SDQPLLNIDRVIDIQRDIDTKRVVALEWLPVELLLALGVTPFGVADIHNYRLWVGEPALPADVINVGQRTEPNLELLQQM APSLILLSQGYGPSPEKLAPIAPTMSFAFNEQGSSPLAVGKNSLQTLGQRLGLETAAQQHLADFDHFMLAARARLSGDTQ TPLLMFSLLDPRHALIIGNGSLFQDVLSTLNIENAWQGETNFWGSAVVGIERLATIKTARAVCFGHGNNEMLQQVARTPL WQSLSFVRENQLRLLPPVWFYGATLSAMRFVRLLEQAWGKAP
Sequences:
>Translated_362_residues MKTHLPMDLSSSSASNYLSGPDCSSDPDCSVRPACSARSDRSVRPDRSSGPDYYRRRLLMALTLSPLLLSLPSLVAAAPK SDQPLLNIDRVIDIQRDIDTKRVVALEWLPVELLLALGVTPFGVADIHNYRLWVGEPALPADVINVGQRTEPNLELLQQM APSLILLSQGYGPSPEKLAPIAPTMSFAFNEQGSSPLAVGKNSLQTLGQRLGLETAAQQHLADFDHFMLAARARLSGDTQ TPLLMFSLLDPRHALIIGNGSLFQDVLSTLNIENAWQGETNFWGSAVVGIERLATIKTARAVCFGHGNNEMLQQVARTPL WQSLSFVRENQLRLLPPVWFYGATLSAMRFVRLLEQAWGKAP >Mature_362_residues MKTHLPMDLSSSSASNYLSGPDCSSDPDCSVRPACSARSDRSVRPDRSSGPDYYRRRLLMALTLSPLLLSLPSLVAAAPK SDQPLLNIDRVIDIQRDIDTKRVVALEWLPVELLLALGVTPFGVADIHNYRLWVGEPALPADVINVGQRTEPNLELLQQM APSLILLSQGYGPSPEKLAPIAPTMSFAFNEQGSSPLAVGKNSLQTLGQRLGLETAAQQHLADFDHFMLAARARLSGDTQ TPLLMFSLLDPRHALIIGNGSLFQDVLSTLNIENAWQGETNFWGSAVVGIERLATIKTARAVCFGHGNNEMLQQVARTPL WQSLSFVRENQLRLLPPVWFYGATLSAMRFVRLLEQAWGKAP
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Required for the transport of all iron(3+)-hydroxamate siderophores such as ferrich
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786346, Length=305, Percent_Identity=51.4754098360656, Blast_Score=305, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008091 - InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 39717; Mature: 39717
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHLPMDLSSSSASNYLSGPDCSSDPDCSVRPACSARSDRSVRPDRSSGPDYYRRRLLM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALTLSPLLLSLPSLVAAAPKSDQPLLNIDRVIDIQRDIDTKRVVALEWLPVELLLALGVT HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCC PFGVADIHNYRLWVGEPALPADVINVGQRTEPNLELLQQMAPSLILLSQGYGPSPEKLAP CCCHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCC IAPTMSFAFNEQGSSPLAVGKNSLQTLGQRLGLETAAQQHLADFDHFMLAARARLSGDTQ CCCHHHHHCCCCCCCCHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPLLMFSLLDPRHALIIGNGSLFQDVLSTLNIENAWQGETNFWGSAVVGIERLATIKTAR CHHHHEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AVCFGHGNNEMLQQVARTPLWQSLSFVRENQLRLLPPVWFYGATLSAMRFVRLLEQAWGK HHEEECCCHHHHHHHHHCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCC AP CC >Mature Secondary Structure MKTHLPMDLSSSSASNYLSGPDCSSDPDCSVRPACSARSDRSVRPDRSSGPDYYRRRLLM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALTLSPLLLSLPSLVAAAPKSDQPLLNIDRVIDIQRDIDTKRVVALEWLPVELLLALGVT HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCC PFGVADIHNYRLWVGEPALPADVINVGQRTEPNLELLQQMAPSLILLSQGYGPSPEKLAP CCCHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCC IAPTMSFAFNEQGSSPLAVGKNSLQTLGQRLGLETAAQQHLADFDHFMLAARARLSGDTQ CCCHHHHHCCCCCCCCHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPLLMFSLLDPRHALIIGNGSLFQDVLSTLNIENAWQGETNFWGSAVVGIERLATIKTAR CHHHHEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AVCFGHGNNEMLQQVARTPLWQSLSFVRENQLRLLPPVWFYGATLSAMRFVRLLEQAWGK HHEEECCCHHHHHHHHHCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCC AP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301821; 2823072; 8202364; 9278503; 7651325; 10742172 [H]