| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is sfsA [H]
Identifier: 22124705
GI number: 22124705
Start: 883546
End: 884421
Strand: Reverse
Name: sfsA [H]
Synonym: y0792
Alternate gene names: 22124705
Gene position: 884421-883546 (Counterclockwise)
Preceding gene: 22124706
Following gene: 161484864
Centisome position: 19.22
GC content: 46.23
Gene sequence:
>876_bases GTGAAAGGAAACCAGATGCCTGCTAACGCCAACTTGCCACCCTTTAGCGCCAACTTACTGTCAGTGAACTCAGATTCGCG GTCAATTAGCCCTAATTCGCCACCGACTCACGCCAAATCGCTGCAATTTAACGCCCCTTTGCTGCAATTTACTCCCCCGT TACAACCCGCCACACTTATTCTGCGGTACAAACGCTTTTTAGCTGATATTGTGACGCCCGCTGGAGAGGCGCTGACTATT CATTGCGCGAATACTGGAGCAATGACGGGTTGTGCTACGCCTGGAGATACCATCTGGTATTCAACATCAGATAATCCGAA ACGGAAGTATCCTCAGAGCTGGGAGCTGACACAGACCCAAACCGGTGATTGGATTTGTGTCAATACGATGCGCGCCAATG AGTTAGTGAACTTGGCAATTGAAAAAAATCAGATTGCTGAATTATCTGGTTACAATTTTGTCAGAAAAGAAGTTAAGTAT GGCGAAGAGAACAGCCGTATAGACTTGTTATTGCAGGCAGAAGATAGACGTGACTGCTATATTGAAGTCAAATCAGTCAC CTTATTACAACAACAGTGTGGTTATTTTCCAGATGCGGTTACTCTAAGGGGCCAGAAGCATCTTCGGGAATTACAAAACA GGGTTGTCAACGGCCACCGGGCAGTACTTTTCTTTGCGGTATTGCATACGGGAATCAAACAAGTTGCACCAGCCCGACAC ATTGATCGTCGCTATGCAGAGTTGCTAGTCCAGGCTCAGCAGGCAGGAGTAGAGGTTATTTGTTATGGTTTTCAACTATC GCCTGACGGTATCGAGCTAAACACCCGTTTACCGTTATTACTGGACGAAATGCTTTCATCAGAAAACGCTGAATAA
Upstream 100 bases:
>100_bases AATGAGACCTTCCAGGCGGACCATTTCTCGCTGTATGAATCGGTCTTCGCGCGGGGCCGCACCCGCTATAACATCGTACA AAGCTGGCCGCTGGCTGGCA
Downstream 100 bases:
>100_bases AAAAGCAATTACTGGGTAAAGTGGCTCGCCAAATACGCCTTCCTTCACACCATTGTCAAGCAGGCGACAGGAATAATTGC CAACCTACCTCCCTTCTGTT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKGNQMPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTI HCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKY GEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARH IDRRYAELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE
Sequences:
>Translated_291_residues MKGNQMPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTI HCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKY GEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARH IDRRYAELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE >Mature_291_residues MKGNQMPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTI HCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKY GEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARH IDRRYAELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=63.6752136752137, Blast_Score=328, Evalue=2e-91,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 32509; Mature: 32509
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNQMPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLI CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHH LRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQ HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCEECC TGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCY CCCEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEE IEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARH EEEHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHH IDRRYAELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE HHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKGNQMPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLI CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHH LRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQ HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCEECC TGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCY CCCEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEE IEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARH EEEHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHH IDRRYAELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE HHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA