| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yhbP [C]
Identifier: 22124631
GI number: 22124631
Start: 805279
End: 805704
Strand: Direct
Name: yhbP [C]
Synonym: y0717
Alternate gene names: 22124631
Gene position: 805279-805704 (Clockwise)
Preceding gene: 22124630
Following gene: 22124632
Centisome position: 17.5
GC content: 51.64
Gene sequence:
>426_bases GTGCTGTTGATCAACCGCTTCCTGCGCCAGCAACATGTGTTGACCTTATGCGCGGGCAGCGGCATGGATATGTGGTGCGC TAGCTGTTTTTACGTATTTGACGAAAATCAGATGGCGCTCTTTCTGATGACAGAAAAGCACACCCGTCATAGCGAACTGA TGTTGATAAACCCGCAAGTGGCTGGCACGGTTGCCACTCAATCCCGCACTATCGCCTTGATAAAGGGCATTCAATATCGT GGTGAAATTAGCCTCTTGAGCGGCGATGCCGAACAGGCGGCCCGCAACCGCTATTGCCGTCGTTTTCCGGTAGCGAAGGT CTCTTCTGCCCCTCTCTGGCAACTCAATCTGCTGGAAATCAAAATGACGAATAACGCCCTCGGCTTTGGTAAAAAATTGC ATTGGTCGCGTGTGGAGCCGTTATGA
Upstream 100 bases:
>100_bases AGAGGGAAAATTGGCAGGTCAGATCAAATAGTAGAAGAAAATTTCATGTACACTGAACGCTGTTTTTACGCCGGAGAGTG ACGTGAATAATCCTGATGAC
Downstream 100 bases:
>100_bases GTTTGGGCTGCAACTTTTCGATTATTAACTGTAAATAATGCTATTTTTGCCTGGTTTATTATTCTTATAAATCCCACTTC ACTCGCACCCTGACCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALIKGIQYR GEISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL
Sequences:
>Translated_141_residues MLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALIKGIQYR GEISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL >Mature_141_residues MLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALIKGIQYR GEISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL
Specific function: Unknown
COG id: COG3787
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0306 family [H]
Homologues:
Organism=Escherichia coli, GI1789544, Length=137, Percent_Identity=47.4452554744526, Blast_Score=149, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011194 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16058; Mature: 16058
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQV CCHHHHHHHHHHEEEEECCCCCCHHHEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCC AGTVATQSRTIALIKGIQYRGEISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEI CEEEECCCEEEEEEECEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE KMTNNALGFGKKLHWSRVEPL EECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQV CCHHHHHHHHHHEEEEECCCCCCHHHEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCC AGTVATQSRTIALIKGIQYRGEISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEI CEEEECCCEEEEEEECEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE KMTNNALGFGKKLHWSRVEPL EECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA