| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124624
Identifier: 22124624
GI number: 22124624
Start: 795986
End: 797956
Strand: Reverse
Name: 22124624
Synonym: y0710
Alternate gene names: NA
Gene position: 797956-795986 (Counterclockwise)
Preceding gene: 22124625
Following gene: 22124623
Centisome position: 17.34
GC content: 50.13
Gene sequence:
>1971_bases GTGAAACAACCGGAGATTATTGCCACGCTGATCGCCGATAATCAGGTGGTTTTAGAGACCGACACACTGGTGCCCGCCAC CGGTATCGCCACCTGGAATCATTACTATTATTGCCCTGAGCATGGTGTCCAGTTGGTATGGGATCGCTTTTCACCTCAAG CACACCGCTGTCCGGTAGATGATCATCTTTTTAGCGGCGAACCCTACGACGGTGCCTGGTGGCGGGCATTAAATGGTTTG AACGCCAAAGCCTGCAATCAACTGGGCTTGCTGTGGCAATTAACCGGAGAAATACGTTACTTCGATAAGGTGCGGGACAT TCTGATGAGTTATGCCCGCTACTACCCTGACTATGAAGTCCACGGTGGTATTCCTTATAACGGGCCGGGTAAGGCGAATG CACAGACCCTGTGTGAGGCAAACTGCCTCCTTGATTTTGCCTTGGGCTATGACTTTATCGCTGATACGCTCAGCCAAGAG CAACGTGATTGTCTTGCTGAGCGCTTATTGCGGGTGGGCGCTGATTTCTTAATGCAACACCGTACCCGTCAGTTGCACAA CCATGAAGTTAAAATCAGTAGCGCTATCGCGGTTATTGGCCTGATCCTTGAAGAGGAGCACTACATTGAGTTTGCGGTTA ACGCAGATTACGGCCTGCGCTACCAGTTAGAGCATGGCTTATTCAACGAAGGGCTGTGGTTTGAAGGCTCGGTGCATTAT CACTTTTATGCACTGCAAGGTTTTTGGTCATTTGAAAAACTGGCGGCCGGTAGCCGCTATAGCCTACTGGCGCTGCCCTA TTACCGCGACATGCTCAGCTTCCCGCTCAAGCTGCTGATGCCCAACGGCACATTCCCGCGCATTAATGATTGTACCGCCG GGCAAGAGCAGCTTAATCATGCGCATCTGTATGAATTTGCTTATCAGATCTACGGCAACCGTGAATATGCGGCGGCCCTG CAACATATTTATCGCCAGCAACCCCGTTTAAATCTGGATGCACTGCTGTATGGGGCTGAATCATTACCACTGCAAATTAT TGATGTCATCCCGACCGATACACTACATGCACCAGATTGCGGATTAACCATCCTACGCCAACCGCAGGCCAGCCGCGCAT TGTTGATAAAACACAGCCCGTATGGCGGCGAGCATGATCATTATGATCGGCTAAATTTAATTCTGTTTGACAGGGGCCAC GAAGTCCTGCCCGATTTAGGCACCACCGGTTATGGTGCACAGCGACATTATGACTATTACAAAAACAGCGCCACTCACAA TACGCTCAGTATCAACCAAAAAAATCAGCCTCCTGCAGTGCCTTACATCCGTCAATGGCATCAGGCAGCAAACTTCAGTT GGCTGGATACCGAAGTCGATTGGCGTCAAACCGCGCCTGAGTTAGACAGCCATACCCGCGTACAATGGGATGAAGCGTCT TATCGTGATGTTAAATTCCGCCGCCGTATTTTATGGCTGGAAGATACGATTATCGATATTAGCAATATCGTTAATCCCCA TCAGCAGTCGTGGAACTGGACGCTGTATATTGATGGGACTGCGACAGAACAGAAAGGTGAAATGACGTCCTTCGGTGACA GCGGCCCGATGCAGTATGTGCATCAGGTGACCGCCCAACCACTAAATGGGGTGATGTCGTGCCGTTACCAAACCACAGCA CGCCCACTGACACTGTGGTTAGCCGCTGATGCCACGCTATTTCAAGGGCTGGCCCCAGCGAATCCGTCGGTACGTGATCT CAGCTACCTGATGTTACGCAACCAACAACCAGCAGCTCAGGTCACCTGTGTTTTTGACTTGAATGACAGTAACCCGTTAC TGCACGTTGAGGTGGAAACTAACGGCGAAATATTATCAATAGAATTAATCCGCCAACAGCAAACCATGCGGATAAACATT CCTTTAACCAGCAACCAACTGCCGCAATTTAGCCAGGCGTATCCATCTTAG
Upstream 100 bases:
>100_bases TACTTTACCCAATCACAACGCAAAAATAAGCATCGCCGAGGACACGCCAGATATGAAGCAGTTTACGGATCGGCAGATGG TTAAAATCCGCCAGCGCGTT
Downstream 100 bases:
>100_bases CTAGGTGTATCTATCGCGGGGCCGCTTTTGCCCCGCGTCTACGACGTCGTCGTCTACTCTCTGTTTTTTTCTCCTACACG GTCTTCTGCCCACGGCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Chondroitin AC/Alginate Lyase; Heparinase II/III-Like Protein; Heparinase II/III-Like; Alginate Lyase
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MKQPEIIATLIADNQVVLETDTLVPATGIATWNHYYYCPEHGVQLVWDRFSPQAHRCPVDDHLFSGEPYDGAWWRALNGL NAKACNQLGLLWQLTGEIRYFDKVRDILMSYARYYPDYEVHGGIPYNGPGKANAQTLCEANCLLDFALGYDFIADTLSQE QRDCLAERLLRVGADFLMQHRTRQLHNHEVKISSAIAVIGLILEEEHYIEFAVNADYGLRYQLEHGLFNEGLWFEGSVHY HFYALQGFWSFEKLAAGSRYSLLALPYYRDMLSFPLKLLMPNGTFPRINDCTAGQEQLNHAHLYEFAYQIYGNREYAAAL QHIYRQQPRLNLDALLYGAESLPLQIIDVIPTDTLHAPDCGLTILRQPQASRALLIKHSPYGGEHDHYDRLNLILFDRGH EVLPDLGTTGYGAQRHYDYYKNSATHNTLSINQKNQPPAVPYIRQWHQAANFSWLDTEVDWRQTAPELDSHTRVQWDEAS YRDVKFRRRILWLEDTIIDISNIVNPHQQSWNWTLYIDGTATEQKGEMTSFGDSGPMQYVHQVTAQPLNGVMSCRYQTTA RPLTLWLAADATLFQGLAPANPSVRDLSYLMLRNQQPAAQVTCVFDLNDSNPLLHVEVETNGEILSIELIRQQQTMRINI PLTSNQLPQFSQAYPS
Sequences:
>Translated_656_residues MKQPEIIATLIADNQVVLETDTLVPATGIATWNHYYYCPEHGVQLVWDRFSPQAHRCPVDDHLFSGEPYDGAWWRALNGL NAKACNQLGLLWQLTGEIRYFDKVRDILMSYARYYPDYEVHGGIPYNGPGKANAQTLCEANCLLDFALGYDFIADTLSQE QRDCLAERLLRVGADFLMQHRTRQLHNHEVKISSAIAVIGLILEEEHYIEFAVNADYGLRYQLEHGLFNEGLWFEGSVHY HFYALQGFWSFEKLAAGSRYSLLALPYYRDMLSFPLKLLMPNGTFPRINDCTAGQEQLNHAHLYEFAYQIYGNREYAAAL QHIYRQQPRLNLDALLYGAESLPLQIIDVIPTDTLHAPDCGLTILRQPQASRALLIKHSPYGGEHDHYDRLNLILFDRGH EVLPDLGTTGYGAQRHYDYYKNSATHNTLSINQKNQPPAVPYIRQWHQAANFSWLDTEVDWRQTAPELDSHTRVQWDEAS YRDVKFRRRILWLEDTIIDISNIVNPHQQSWNWTLYIDGTATEQKGEMTSFGDSGPMQYVHQVTAQPLNGVMSCRYQTTA RPLTLWLAADATLFQGLAPANPSVRDLSYLMLRNQQPAAQVTCVFDLNDSNPLLHVEVETNGEILSIELIRQQQTMRINI PLTSNQLPQFSQAYPS >Mature_656_residues MKQPEIIATLIADNQVVLETDTLVPATGIATWNHYYYCPEHGVQLVWDRFSPQAHRCPVDDHLFSGEPYDGAWWRALNGL NAKACNQLGLLWQLTGEIRYFDKVRDILMSYARYYPDYEVHGGIPYNGPGKANAQTLCEANCLLDFALGYDFIADTLSQE QRDCLAERLLRVGADFLMQHRTRQLHNHEVKISSAIAVIGLILEEEHYIEFAVNADYGLRYQLEHGLFNEGLWFEGSVHY HFYALQGFWSFEKLAAGSRYSLLALPYYRDMLSFPLKLLMPNGTFPRINDCTAGQEQLNHAHLYEFAYQIYGNREYAAAL QHIYRQQPRLNLDALLYGAESLPLQIIDVIPTDTLHAPDCGLTILRQPQASRALLIKHSPYGGEHDHYDRLNLILFDRGH EVLPDLGTTGYGAQRHYDYYKNSATHNTLSINQKNQPPAVPYIRQWHQAANFSWLDTEVDWRQTAPELDSHTRVQWDEAS YRDVKFRRRILWLEDTIIDISNIVNPHQQSWNWTLYIDGTATEQKGEMTSFGDSGPMQYVHQVTAQPLNGVMSCRYQTTA RPLTLWLAADATLFQGLAPANPSVRDLSYLMLRNQQPAAQVTCVFDLNDSNPLLHVEVETNGEILSIELIRQQQTMRINI PLTSNQLPQFSQAYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75202; Mature: 75202
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPEIIATLIADNQVVLETDTLVPATGIATWNHYYYCPEHGVQLVWDRFSPQAHRCPVD CCCCCEEEEEEECCEEEEEECCCCCCCCEEECCCEEECCCCCCEEEEECCCCCCCCCCCC DHLFSGEPYDGAWWRALNGLNAKACNQLGLLWQLTGEIRYFDKVRDILMSYARYYPDYEV CCCCCCCCCCCHHHHHHCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEE HGGIPYNGPGKANAQTLCEANCLLDFALGYDFIADTLSQEQRDCLAERLLRVGADFLMQH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTRQLHNHEVKISSAIAVIGLILEEEHYIEFAVNADYGLRYQLEHGLFNEGLWFEGSVHY HHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCEEE HFYALQGFWSFEKLAAGSRYSLLALPYYRDMLSFPLKLLMPNGTFPRINDCTAGQEQLNH EEEEEECCCCHHHHCCCCCEEEEECHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH AHLYEFAYQIYGNREYAAALQHIYRQQPRLNLDALLYGAESLPLQIIDVIPTDTLHAPDC HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEEECCCCCCEEEEEECCCCCCCCCCC GLTILRQPQASRALLIKHSPYGGEHDHYDRLNLILFDRGHEVLPDLGTTGYGAQRHYDYY CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH KNSATHNTLSINQKNQPPAVPYIRQWHQAANFSWLDTEVDWRQTAPELDSHTRVQWDEAS CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCEEEECCCC YRDVKFRRRILWLEDTIIDISNIVNPHQQSWNWTLYIDGTATEQKGEMTSFGDSGPMQYV CHHHHHHHEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH HQVTAQPLNGVMSCRYQTTARPLTLWLAADATLFQGLAPANPSVRDLSYLMLRNQQPAAQ HHHHHHHHHHHHEEEEECCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE VTCVFDLNDSNPLLHVEVETNGEILSIELIRQQQTMRINIPLTSNQLPQFSQAYPS EEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHCCCC >Mature Secondary Structure MKQPEIIATLIADNQVVLETDTLVPATGIATWNHYYYCPEHGVQLVWDRFSPQAHRCPVD CCCCCEEEEEEECCEEEEEECCCCCCCCEEECCCEEECCCCCCEEEEECCCCCCCCCCCC DHLFSGEPYDGAWWRALNGLNAKACNQLGLLWQLTGEIRYFDKVRDILMSYARYYPDYEV CCCCCCCCCCCHHHHHHCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEE HGGIPYNGPGKANAQTLCEANCLLDFALGYDFIADTLSQEQRDCLAERLLRVGADFLMQH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTRQLHNHEVKISSAIAVIGLILEEEHYIEFAVNADYGLRYQLEHGLFNEGLWFEGSVHY HHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCEEE HFYALQGFWSFEKLAAGSRYSLLALPYYRDMLSFPLKLLMPNGTFPRINDCTAGQEQLNH EEEEEECCCCHHHHCCCCCEEEEECHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH AHLYEFAYQIYGNREYAAALQHIYRQQPRLNLDALLYGAESLPLQIIDVIPTDTLHAPDC HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEEECCCCCCEEEEEECCCCCCCCCCC GLTILRQPQASRALLIKHSPYGGEHDHYDRLNLILFDRGHEVLPDLGTTGYGAQRHYDYY CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH KNSATHNTLSINQKNQPPAVPYIRQWHQAANFSWLDTEVDWRQTAPELDSHTRVQWDEAS CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCEEEECCCC YRDVKFRRRILWLEDTIIDISNIVNPHQQSWNWTLYIDGTATEQKGEMTSFGDSGPMQYV CHHHHHHHEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH HQVTAQPLNGVMSCRYQTTARPLTLWLAADATLFQGLAPANPSVRDLSYLMLRNQQPAAQ HHHHHHHHHHHHEEEEECCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE VTCVFDLNDSNPLLHVEVETNGEILSIELIRQQQTMRINIPLTSNQLPQFSQAYPS EEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA