| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is sfsB [H]
Identifier: 22124583
GI number: 22124583
Start: 754397
End: 754672
Strand: Reverse
Name: sfsB [H]
Synonym: y0669
Alternate gene names: 22124583
Gene position: 754672-754397 (Counterclockwise)
Preceding gene: 22124585
Following gene: 22124581
Centisome position: 16.4
GC content: 49.64
Gene sequence:
>276_bases ATGATTTTAAGGAAATCTGATTGGCACCCAGCCGACATCATTGCTGCACTACGTAAGAAAGGTACGACTCTGGCAGCCCT TTCCCGCAAGGCAGGATTAAGCTCTTCTACGCTCGCCAATGCATTGACGCGACCTTGGCCGAAAGGCGAGTGGTTGATTG CAGAGTGTCTGGATATTCATCCTTCGGAGATCTGGCCAACACGTTATTTTGACCCCAAGACAGGGAATCTCCTTGATCGC AAAGTAAGGATACGACCAACCACAACGCAGCCATAA
Upstream 100 bases:
>100_bases ATCTTTCTAAATGATTACTTTTTGTTCACTGTATAATTAACGATGTACCGTTATTTATATCACTAACACGTCAGCAGCTT AGAAAAAAAAAGGATTAAAG
Downstream 100 bases:
>100_bases AAAAAACTATCAGCTTACCGCTCACAGGGTGGGGGGTGAACGTCTTATTACACCGCCGATAAATCTCATAACGACGGGCA GTATCATTACAATATCAGGG
Product: regulator for maltose metabolism
Products: NA
Alternate protein names: Ner-like protein [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR KVRIRPTTTQP
Sequences:
>Translated_91_residues MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR KVRIRPTTTQP >Mature_91_residues MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR KVRIRPTTTQP
Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]
COG id: COG3423
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ner transcriptional regulatory family [H]
Homologues:
Organism=Escherichia coli, GI1789579, Length=82, Percent_Identity=64.6341463414634, Blast_Score=109, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010982 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10261; Mature: 10261
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIH CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHCC PSEIWPTRYFDPKTGNLLDRKVRIRPTTTQP CCCCCCCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIH CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHCC PSEIWPTRYFDPKTGNLLDRKVRIRPTTTQP CCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]