Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

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The map label for this gene is terD [H]

Identifier: 22124473

GI number: 22124473

Start: 625850

End: 626434

Strand: Direct

Name: terD [H]

Synonym: y0559

Alternate gene names: 22124473

Gene position: 625850-626434 (Clockwise)

Preceding gene: 22124472

Following gene: 22124474

Centisome position: 13.6

GC content: 47.86

Gene sequence:

>585_bases
ATGAAAATGGGTGTATCTCTTTCGAAAGGCGGTAATGTCTCCCTGAGTAAAGAAGCTCCAACAATGACGAATGTGCTGAT
TGGCCTCGGCTGGGATGCCCGTTCTACAGATGGTCAGGATTTCGACCTGGATGCTTCAGCTTTTCTTTTGACTGCAAACG
GCAAAGTACGTAACGATGCAGATTTCATTTTCTACAACAATCTGAAATCATCTGATGGTTCAGTGATGCACACCGGTGAT
AACCGTACTGGTGAAGGCGAGGGTGACGATGAGTCGCTGAAAATCAAATTGCCTTTGATCCCAGCAGATGTGGATAAGAT
TGTTTTCGTTGTCACTATTCATGATGCTCAGGCGCGCCGTCAGAGCTTCGGTCAGGTGGCTAATGCCTTTATTCGCCTGG
TAAACGATGATAATGGCGTTGAAATTGCGCGTTACGACCTGTCTGAAGATGCGTCCACCGAAACAGCGATGCTGTTTGGT
GAGCTGTATCGCCATAATGCGGAGTGGAAATTCCGTGCGGTAGGTCAGGGCTATGCGGGTGGTTTGTCGTCTGTTTGTGC
TCAGTATGGCATCAACGCATCTTAA

Upstream 100 bases:

>100_bases
CTTCCTGTTCCCTGAAAAGGATTCAAAGGAAGGACAGCACTAACGTAGGGTTTTAGAGACCTGATGATGTAAATTGAATT
AATACTTAACTACTGAGGAA

Downstream 100 bases:

>100_bases
TCATTCCCTTCGTTTTTGACGTTGCAGGGGGTAGCTACGTCAGCGTATCCGTTGAATAAATTCATCGGGGTTTGCTGGTT
ACTTACCTGTAACGCCAATC

Product: tellurium resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKMGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGD
NRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFG
ELYRHNAEWKFRAVGQGYAGGLSSVCAQYGINAS

Sequences:

>Translated_194_residues
MKMGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGD
NRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFG
ELYRHNAEWKFRAVGQGYAGGLSSVCAQYGINAS
>Mature_194_residues
MKMGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDADFIFYNNLKSSDGSVMHTGD
NRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARRQSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFG
ELYRHNAEWKFRAVGQGYAGGLSSVCAQYGINAS

Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]

COG id: COG2310

COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CAPAB/TerDEXZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003325 [H]

Pfam domain/function: PF02342 TerD [H]

EC number: NA

Molecular weight: Translated: 20935; Mature: 20935

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDA
CCCCCEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
DFIFYNNLKSSDGSVMHTGDNRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARR
CEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHH
QSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGELYRHNAEWKFRAVGQGYAG
HHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
GLSSVCAQYGINAS
CHHHHHHHHCCCCC
>Mature Secondary Structure
MKMGVSLSKGGNVSLSKEAPTMTNVLIGLGWDARSTDGQDFDLDASAFLLTANGKVRNDA
CCCCCEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
DFIFYNNLKSSDGSVMHTGDNRTGEGEGDDESLKIKLPLIPADVDKIVFVVTIHDAQARR
CEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHH
QSFGQVANAFIRLVNDDNGVEIARYDLSEDASTETAMLFGELYRHNAEWKFRAVGQGYAG
HHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
GLSSVCAQYGINAS
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3049247 [H]