| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124442
Identifier: 22124442
GI number: 22124442
Start: 596030
End: 596428
Strand: Direct
Name: 22124442
Synonym: y0528
Alternate gene names: NA
Gene position: 596030-596428 (Clockwise)
Preceding gene: 22124441
Following gene: 22124443
Centisome position: 12.96
GC content: 50.13
Gene sequence:
>399_bases ATGAGTCGAATCGATATTGAAGGCGCGTTACCGCCACTAAGAGAACAAGGTTATTCAAAAGAGCGATCAACACATTGGGA TCATGAGAGGCAACGTCAGCAGTTTGCTCGCTGTTTCTCCTCTCCCTTACCCCGAATACAAAACATAGCGTGTACCGTTG CTGGGTATGACGATAACGGCCTGATGGAGACGCATTATCGTATCGTCAGTGGGCCGCTATGTGGGACAAAAGTCAGTGTC AGCATGACGGCTCACGGGTTACGTATCGTGCTCAGTAATACAGAGAGCAAACTGATTGAACGCTTACAGCGCATACAAAA CCGCTGGCAGCGGCAACTGCATCAGTTAGGGTTCCCGTGTTTACTGGAGGTCACCTGTGCTGACGAATCTGACGCCTGA
Upstream 100 bases:
>100_bases GTGGCGCAAGGGCGGCAACAGGTCAGTGCCATTGAGCGACAACAAGCGCGGTTACGGCGTAATCAGCGTGAACAGGAAAA ATTACGGATGCTGACAGAAG
Downstream 100 bases:
>100_bases GTTACGCGCCCTTAGCACCTTGATCGGGAGTGGCCGGCAGACAGCAGGGGTGTCGGTGGCCTTGACGGAGATTGACGGTG AGGGCGTTTATCTGCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSRIDIEGALPPLREQGYSKERSTHWDHERQRQQFARCFSSPLPRIQNIACTVAGYDDNGLMETHYRIVSGPLCGTKVSV SMTAHGLRIVLSNTESKLIERLQRIQNRWQRQLHQLGFPCLLEVTCADESDA
Sequences:
>Translated_132_residues MSRIDIEGALPPLREQGYSKERSTHWDHERQRQQFARCFSSPLPRIQNIACTVAGYDDNGLMETHYRIVSGPLCGTKVSV SMTAHGLRIVLSNTESKLIERLQRIQNRWQRQLHQLGFPCLLEVTCADESDA >Mature_131_residues SRIDIEGALPPLREQGYSKERSTHWDHERQRQQFARCFSSPLPRIQNIACTVAGYDDNGLMETHYRIVSGPLCGTKVSVS MTAHGLRIVLSNTESKLIERLQRIQNRWQRQLHQLGFPCLLEVTCADESDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15095; Mature: 14964
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIDIEGALPPLREQGYSKERSTHWDHERQRQQFARCFSSPLPRIQNIACTVAGYDDNG CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCC LMETHYRIVSGPLCGTKVSVSMTAHGLRIVLSNTESKLIERLQRIQNRWQRQLHQLGFPC CHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCE LLEVTCADESDA EEEEEECCCCCC >Mature Secondary Structure SRIDIEGALPPLREQGYSKERSTHWDHERQRQQFARCFSSPLPRIQNIACTVAGYDDNG CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCC LMETHYRIVSGPLCGTKVSVSMTAHGLRIVLSNTESKLIERLQRIQNRWQRQLHQLGFPC CHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCE LLEVTCADESDA EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA