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The map label for this gene is ssaV [H]

Identifier: 22124439

GI number: 22124439

Start: 592273

End: 594327

Strand: Direct

Name: ssaV [H]

Synonym: y0525

Alternate gene names: 22124439

Gene position: 592273-594327 (Clockwise)

Preceding gene: 22124438

Following gene: 22124440

Centisome position: 12.87

GC content: 51.92

Gene sequence:

>2055_bases
ATGTTTATGAGTAAGTCAGCACTGGTGCGGGGTTTGACGATGATCACCGCGCGGCAGGATATTTTTTTAGCGGTCATGTT
GCTGGTGGCGGTCTTTATGATGATCCTGCCACTGCCTACGACGATGGTGGATTTACTGATCGCCATCAATCTTGCCTTCT
CCGTCATTCTCTTAATGATCTCGATCTATCTGCGCGATCCTTTGGAGTTCTCCGTCTTCCCGTCATTACTGTTGATCACC
ACCCTTTATCGATTGGCACTGACGATCAGCACCACGCGACTGGTGCTGTTGCAACATGATGCCGGTGAGATTGTCGAGGC
ATTCGGTCAGTTTGTCGTGGGCGGTAATCTGGCCGTCGGGATGATCATTTTTACCATTATCACGGTGGTCCAATTTATCG
TGATTACCAAAGGTTCAGAGCGGGTTGCTGAGGTCAGTGCGCGCTTCTCACTTGATGGTATGCCGGGTAAGCAGATGAGC
ATCGACGGCGACATGCGTGCGGGTGCGATCGATTCGGTCGAAGCTAAACGGCTACGGGAGCGGGTACAAAAAGAGAGCCG
CTTATTTGGTGCTATGGACGGTGCCATGAAGTTTGTTAAAGGGGATGCCATCGCTGGGATCATTGTCATTCTGATCAATA
TCATTGGCGGTATCACTATTGGTGTGATGCAACACAAGATGTCCGCGGAAGAGGCGATGAATACCTACGCGGTATTATCG
ATAGGCGATGGATTGTGCGCCCAAATCCCTTCATTACTGATCTCGATTACCGCCGGGATTATTGTTACCCGGGTTCCTGG
CAGCAACAAACAGAGTCTGGCGAATGAGTTGGCGGTGCAGGTGGGGCGTCAACCGGATGCGCTGTGGTTAGCTGCCGCTA
TTCTGACGGTGTTCGCCCTGTTACCCGGCTTCCCGTTCCTGATCTTTATCACTTTGGCGGCCGCGGTTGCGGCTCCGGCT
TTTTTACTTTATCGGAAGAACCGGCGGATATCGCAGGATGGTCGCGCAAATGGAGGCAGTGAAGAGGGGGGGGCCACGGG
GCAGCGTATGACGCCTGGTGCCGTACCGCTGATGCTGCACTGTGCATCAAATTTACATCACCCGCATTTAGGGCGCGATA
TTGATGGCCTACGCTGGCGCTGGTTTGAGCATCTCGGTGTGCCATTGCCTGAGGTGGAGATCCGCTGTGATCCTACATTG
GCAGAAAATACCTTATCGGTGCAGGTGTATCAGGAGCGGGTGCTGGAGGTTGTGTTACCGCCCGACAGCTTGTTACTGAC
ACGGCCTTGCTCATCGTTAGTAACGAACAATCAGGTATTGGGCGCGAAGATGGGGTCATTTGATTGGCTGGATGCTAAAC
AGGCTATGCAAGCCAGAACCTTGGGTATCCCTTACGTGGAGGGGCATCAGCGGATCATCACCTGTCTGACCAGGGTGTTT
GAACGGTACACCGCCGAATTTATCGGCGTACAGGAGACTCGCTACCTGATGGATGCCATGGAAGGGCGCTATGGTGAGTT
AGTGAAAGAGCTACAACGGCAGATACCCGTCGGTAAAGTGGCTGAAATATTACAACGGCTGGTTGAGGAAAATATTTCCA
TTCGCGATTTACGGACTATTTTCGGCGCGTTGGTGGTTTGGGCACCGAAAGAAAAAGATATCGTGATGCTCACCGAATAT
GTCCGTATCGCCTTGCGCCGTCATTTGTGCCGTCGCTTTAGTCACAATAAAACCTGGATATCAGTATTACGCCTCGGTGA
TGGGGTGGAGCATCTGATCCGCGACTCTATCCGCCAGACATCATCAGGCACTTACTCCGCACTGGAGGAGAGGCAATCCC
TCTTGATCCTCAACAAAATAAAAAACGCATTTGCTGAAAACCAGGATGCGGTATTGCTTACCACCCTCGATGTTCGTCGC
TTTGTCCGCAAAATTATTGAGCGGGATCTCTTCGTGCTACCGGTACTTTCCTGGCAGGAACTGGGCGATGAAATGAATCT
CAAGGTGGCGGGCACCATTGAACTGATTGGCGATGAACTTGATGAAACTGCCTGA

Upstream 100 bases:

>100_bases
CTCAGCTCTCCAATGCTGCAACTTACGCTTTCTCTCCACCACCATTTATCTCAACTGGTTCTGTGGCTACAGCAGTCGCC
AGATCTTTTCGACGAAGAGA

Downstream 100 bases:

>100_bases
TATCGCGCGGTTAACCCCCCGCCTGCAACAACAACTCACGCGACCGTCGGCACCACCGGAGGGCTTGCGTTACCGTGGGC
CGATTGTGGAGATTGGGCCG

Product: secretion system apparatus protein SsaV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MFMSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLIT
TLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMS
IDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLS
IGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPA
FLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL
AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVF
ERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEY
VRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRR
FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELDETA

Sequences:

>Translated_684_residues
MFMSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLIT
TLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMS
IDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLS
IGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPA
FLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL
AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVF
ERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEY
VRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRR
FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELDETA
>Mature_684_residues
MFMSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLIT
TLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMS
IDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLS
IGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPA
FLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL
AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVF
ERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEY
VRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRR
FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELDETA

Specific function: Required For Formation Of The Rod Structure Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=686, Percent_Identity=34.2565597667638, Blast_Score=349, Evalue=3e-97,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75783; Mature: 75783

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCHHHH
MIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
IGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFAL
ECCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLH
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
CASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLP
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECC
PDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVF
CCCCEEECCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTI
HHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
FGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQT
HHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHC
SSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCHHH
LGDEMNLKVAGTIELIGDELDETA
CCCCCCEEEEEEHHHHCCHHCCCC
>Mature Secondary Structure
MFMSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCHHHH
MIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
IGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFAL
ECCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLH
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
CASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLP
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECC
PDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVF
CCCCEEECCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTI
HHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
FGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQT
HHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHC
SSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCHHH
LGDEMNLKVAGTIELIGDELDETA
CCCCCCEEEEEEHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]