| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124437
Identifier: 22124437
GI number: 22124437
Start: 591046
End: 591642
Strand: Direct
Name: 22124437
Synonym: y0523
Alternate gene names: NA
Gene position: 591046-591642 (Clockwise)
Preceding gene: 22124435
Following gene: 22124438
Centisome position: 12.85
GC content: 54.44
Gene sequence:
>597_bases ATGATGGCATTTTCACCGTCCATCGACGTGCAATATTTACACCAGCTAGCTTGGCGACCAGCACAGTTTGCCCACCCATT ATGGTTGGCAGCGGTGGGCGTTAACCCAGAAAACTACGGCTATGGGCGCAGCCGGGCATTGGACAGTGCGTTGAATGGCA TGTTGATTCAACGGCGAAAATTTCCGCAACAACGCCTGCCTGCGGTATTAAACCCTCGGCAACAGCGCCAAATTGCACAG CGCCAACGCTTACCGGCCCTGTGTCTGGCGCTCGGGGTTGTCAGTTTGCAGTGCGATGATTATTTGCGTCTCCGCCGCTA CCGGCAGGTGCTGTCTCCGCTGCTAAATGACGATGATATTCAACAAATTATAGGGATGGGATATCGCGGTCAGTGGCAAG CCAGTCTAAGCCCACAGCAGCTACCCGATGTGGCATTACGCCTGGGGCAAAGCCTTGCCTGCCAAGTTCGCAGTAACAAT ATTATTTGGCAGGCGGTCTCCATCTTGCTCCCCCCTAACCCCCGTGCGCTATGCCTGTCACGTTCTATGCAGGCGCAAAC AGAAGCCTGGTTAAGCCGGTTGGAGCGTTTATTGTGA
Upstream 100 bases:
>100_bases ATAAAACGGTATCCGACAGTAAATCAGACATGTCAGTACGGTCATACATGTCAGTAAATCATCGATAAAAAAGCGAATAC CCAACGTAACCAGGGAGGGC
Downstream 100 bases:
>100_bases ACCCCTTTCACCTCGAGATTGAAAAGTACGGTTATCCATTGCCGCCTGGCGTAGTTATTCCGGCGGCTTATCTGGCAGAG GCCATGCACAGCCAGGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MMAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSALNGMLIQRRKFPQQRLPAVLNPRQQRQIAQ RQRLPALCLALGVVSLQCDDYLRLRRYRQVLSPLLNDDDIQQIIGMGYRGQWQASLSPQQLPDVALRLGQSLACQVRSNN IIWQAVSILLPPNPRALCLSRSMQAQTEAWLSRLERLL
Sequences:
>Translated_198_residues MMAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSALNGMLIQRRKFPQQRLPAVLNPRQQRQIAQ RQRLPALCLALGVVSLQCDDYLRLRRYRQVLSPLLNDDDIQQIIGMGYRGQWQASLSPQQLPDVALRLGQSLACQVRSNN IIWQAVSILLPPNPRALCLSRSMQAQTEAWLSRLERLL >Mature_198_residues MMAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSALNGMLIQRRKFPQQRLPAVLNPRQQRQIAQ RQRLPALCLALGVVSLQCDDYLRLRRYRQVLSPLLNDDDIQQIIGMGYRGQWQASLSPQQLPDVALRLGQSLACQVRSNN IIWQAVSILLPPNPRALCLSRSMQAQTEAWLSRLERLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22592; Mature: 22592
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSALNGMLIQRRK CCCCCCCCCHHHHHHHHCCCHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC FPQQRLPAVLNPRQQRQIAQRQRLPALCLALGVVSLQCDDYLRLRRYRQVLSPLLNDDDI CCHHHCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHH QQIIGMGYRGQWQASLSPQQLPDVALRLGQSLACQVRSNNIIWQAVSILLPPNPRALCLS HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHCCCCCCHHHHH RSMQAQTEAWLSRLERLL HHHHHHHHHHHHHHHHHC >Mature Secondary Structure MMAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSALNGMLIQRRK CCCCCCCCCHHHHHHHHCCCHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC FPQQRLPAVLNPRQQRQIAQRQRLPALCLALGVVSLQCDDYLRLRRYRQVLSPLLNDDDI CCHHHCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHH QQIIGMGYRGQWQASLSPQQLPDVALRLGQSLACQVRSNNIIWQAVSILLPPNPRALCLS HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHCCCCCCHHHHH RSMQAQTEAWLSRLERLL HHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA