| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124433
Identifier: 22124433
GI number: 22124433
Start: 589333
End: 589551
Strand: Direct
Name: 22124433
Synonym: y0518
Alternate gene names: NA
Gene position: 589333-589551 (Clockwise)
Preceding gene: 22124432
Following gene: 22124434
Centisome position: 12.81
GC content: 42.92
Gene sequence:
>219_bases TTGATGCAGATAAGTAGCCCAATGGGCCAATTGACAAACGATATTCAGCAGGCCAGACAGGCGTATCAGAACCAAATGGC GGCAGTGAATATCAATGACCCCGAACAGATGTTGACGTCGCAATTCACCATGAATCAGTATTCGGCTTTTCTCGATTTCA AAAGTATCGAGATGAAAATGATCAACGATATAAGAAACAGAATCCTGTCCCGCATATGA
Upstream 100 bases:
>100_bases GGAGTGTGGTTTTAGTAATCACGCGCATTTCTCAGATAGCTTTCGTCGGCGCTTTCAACAATGCCCATCGCATATGCGTT CACTTATTGAATAGGAGAGT
Downstream 100 bases:
>100_bases GCTTACTTTCAGCGGATTGCCGTCAGTTGGTGGTCGAGGCCGCACTGGCGGGTGTCAATCACAGCTTGCTGGCCGAAGCC CACGATATCGTCAATGCGTT
Product: type III secretion system component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MMQISSPMGQLTNDIQQARQAYQNQMAAVNINDPEQMLTSQFTMNQYSAFLDFKSIEMKMINDIRNRILSRI
Sequences:
>Translated_72_residues MMQISSPMGQLTNDIQQARQAYQNQMAAVNINDPEQMLTSQFTMNQYSAFLDFKSIEMKMINDIRNRILSRI >Mature_72_residues MMQISSPMGQLTNDIQQARQAYQNQMAAVNINDPEQMLTSQFTMNQYSAFLDFKSIEMKMINDIRNRILSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8405; Mature: 8405
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 11.1 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.1 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQISSPMGQLTNDIQQARQAYQNQMAAVNINDPEQMLTSQFTMNQYSAFLDFKSIEMKM CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INDIRNRILSRI HHHHHHHHHHCC >Mature Secondary Structure MMQISSPMGQLTNDIQQARQAYQNQMAAVNINDPEQMLTSQFTMNQYSAFLDFKSIEMKM CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INDIRNRILSRI HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA