Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is 22124291

Identifier: 22124291

GI number: 22124291

Start: 420253

End: 420741

Strand: Reverse

Name: 22124291

Synonym: y0376

Alternate gene names: NA

Gene position: 420741-420253 (Counterclockwise)

Preceding gene: 22124293

Following gene: 22124274

Centisome position: 9.15

GC content: 46.01

Gene sequence:

>489_bases
TTGATTTTTAATATATTTTTCAATGAATTAAATGTCACCTTCTCACGACAATGTGATCGTTTATTGTCGTGGAAAACCAA
CACTGACGCCCAACACAACGAAACAGCCCAGCTAACGGTACTGGCAGCAGAATGCGATCAAAGGGAGCTAATAATGGAGG
TGATTAACAAAGTACCTGTGGCGCGGAGGATACGGCGAATAAAGGGGGGAAAGTTGCAGGTCGGTCTGTCGGTCTGGCAA
AATAGAATCATTATATTCAGGCGAAAAAAAACCCCGCATTGCGGGGTTTCTTCTGAAATTGGTCGGCGAGAGAGGATTCG
AACCTCCGACCCACTGGTCCCAAACCAGTTGCGCTACCAAGCTGCGCTACTCGCCGATTTCTTGCTGCTTACTCTACATG
GTCTCTCGACCTATGTCCATGTAAATATTAATAAATATCTACATGTTTGTGTGGTGCGAAGGGAGGGACTTGAACCCTCA
CGTCCGTAA

Upstream 100 bases:

>100_bases
TATTTTTTTGACTGCATTTCATTCATCCCCATCGGCTAACCGAGTGATATCCCGGTGACCAGAGTGAACTGTCGCTACAA
AACGACGTTATAACCCTACA

Downstream 100 bases:

>100_bases
GGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCATCGCATGTTCCACAAAAATTTGGGGTGGCTAATGG
GACTCGAACCCACGACAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIFNIFFNELNVTFSRQCDRLLSWKTNTDAQHNETAQLTVLAAECDQRELIMEVINKVPVARRIRRIKGGKLQVGLSVWQ
NRIIIFRRKKTPHCGVSSEIGRRERIRTSDPLVPNQLRYQAALLADFLLLTLHGLSTYVHVNINKYLHVCVVRREGLEPS
RP

Sequences:

>Translated_162_residues
MIFNIFFNELNVTFSRQCDRLLSWKTNTDAQHNETAQLTVLAAECDQRELIMEVINKVPVARRIRRIKGGKLQVGLSVWQ
NRIIIFRRKKTPHCGVSSEIGRRERIRTSDPLVPNQLRYQAALLADFLLLTLHGLSTYVHVNINKYLHVCVVRREGLEPS
RP
>Mature_162_residues
MIFNIFFNELNVTFSRQCDRLLSWKTNTDAQHNETAQLTVLAAECDQRELIMEVINKVPVARRIRRIKGGKLQVGLSVWQ
NRIIIFRRKKTPHCGVSSEIGRRERIRTSDPLVPNQLRYQAALLADFLLLTLHGLSTYVHVNINKYLHVCVVRREGLEPS
RP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18789; Mature: 18789

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNIFFNELNVTFSRQCDRLLSWKTNTDAQHNETAQLTVLAAECDQRELIMEVINKVPV
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHH
ARRIRRIKGGKLQVGLSVWQNRIIIFRRKKTPHCGVSSEIGRRERIRTSDPLVPNQLRYQ
HHHHHHHCCCEEEEEHHHHCCEEEEEEECCCCCCCCCHHHCHHHCCCCCCCCCCHHHHHH
AALLADFLLLTLHGLSTYVHVNINKYLHVCVVRREGLEPSRP
HHHHHHHHHHHHHCCCEEEEEEHHHEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIFNIFFNELNVTFSRQCDRLLSWKTNTDAQHNETAQLTVLAAECDQRELIMEVINKVPV
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHH
ARRIRRIKGGKLQVGLSVWQNRIIIFRRKKTPHCGVSSEIGRRERIRTSDPLVPNQLRYQ
HHHHHHHCCCEEEEEHHHHCCEEEEEEECCCCCCCCCHHHCHHHCCCCCCCCCCHHHHHH
AALLADFLLLTLHGLSTYVHVNINKYLHVCVVRREGLEPSRP
HHHHHHHHHHHHHCCCEEEEEEHHHEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA