Click here to switch to the map view.

The map label for this gene is 22124265

Identifier: 22124265

GI number: 22124265

Start: 387774

End: 388946

Strand: Reverse

Name: 22124265

Synonym: y0349

Alternate gene names: NA

Gene position: 388946-387774 (Counterclockwise)

Preceding gene: 22124266

Following gene: 22124264

Centisome position: 8.45

GC content: 49.7

Gene sequence:

>1173_bases
TTGGGTTCCAGAGACGATAATAATGGTTCGCTCAACTTACCCAGTATTGTTGATCTCAGCACCAATGCGAATTTTCAGCC
CGATGGCACGTTACTGGCATCAGCAACCTCAGACTTTACGACCTTTGCAGTGAATACCGGTTATGCCCTTGACCAGGTCC
TCTTTCGCTGTGATGCGGCTGATGTGGATCAGCTCTATGAGATGTATGCCACTAACGGTGACAGCACTTATGGTGGCAGA
TATGAAGACGGCACGATTGCAGGCAATGTGTCCTATGGCTATGCTACTACAGTGATGAATGTGGTTATTCGGTTTACCAA
CCTGGCAACGGGGGAGTATTACGCTCGTATTTGGAAAGGCCGACGCTTAACCGGGCTTGATACTGACAGTAGCGGACGGA
TTTTAGTTAAAGCGAAAAATTTCAGTAATGTGTATACCGAGCTATTTCGTATTGATTATGCCCGTAGTGGCGCTAACAAT
ACGCCATCTTATCTCTATGGACGTAGTCAGCCCAATGCCTATATCGCGTTTAAAGGGCCAGGAATTACTGGCCCGATTGA
GGGTACTGACTCGTACTCAAACTGGCCCGGTTGGTATTCTACCTGGCCTGCATCACTTGGTTTGTACAAATACGTCACAT
TCCGCCGGACCACTATTTGTGCGGTAAGCAACTTTACCCCGACGGTCGTGTTACCCAGGATTTCGGTGGCAGAACTGAAT
AATGGGAATACCAGCTCTGCTGATTTTAATGTGGATTTTCAGTGCCAGACCGGAATTAACTCTGGCGTGACGGCTGGCAC
AGTGGCGATGGGATTTTTAGTGCCGGCGGCCAATGCAGCCAAAGCTCAGGCGCTGGGGTTAATGAACGGCAACGGGGGAG
TAAGCCATTTGGTCTCCGATAACTATGGCGCTGCTGGCACCGCGGGCGGGGTGGGTATTCGCATCTACCGTAACAATAGC
CCGATGTATCTACTGTCAAAAAACGTAACTCAGACAGGTAACAATGGGGGGTGGTATGGTATCTTACAGGGCGCACAAGA
AACCACAGGCAGCGTAGATGGGGGGAACAGTTACACCGAAACTTTCCGTGCTGAGTTAAGCAAAATAAGCGGGCAAACAG
TGACCGCCGGAGCAGTGAATGCACATGCGCAAGTGGTTATCCGTGTCCAATAA

Upstream 100 bases:

>100_bases
ATTACTGATTGGGTTATTTAGCACCTCCGCATGGTCAAACTGCACCCGTATTACCGCACAAAATCAGATAAGTTCCAGTG
ATGGTACCGCCGCTTCATGG

Downstream 100 bases:

>100_bases
TATAATGCTTAGCCGTATCAACCGTAGGCTCCGTGGGTTGCTGCTACTCATGACCACCTGTCGTGTACTGACTCTCCCTG
CGCTGACGATTGGCGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin MrkD; Fimbriae Usher Protein; Fimbrial Subunit Outer Membrane Protein; Fimbriae; Fimbrial Adhesin; Fimbrial Protein Domain-Containing Protein; Fimbrial Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGR
YEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANN
TPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELN
NGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNS
PMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ

Sequences:

>Translated_390_residues
MGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGR
YEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANN
TPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELN
NGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNS
PMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ
>Mature_389_residues
GSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRY
EDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNT
PSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNN
GNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSP
MYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41523; Mature: 41392

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAA
CCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHHHHHHCCCC
DVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKG
CHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC
RRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGP
CEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECC
GITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCEEEEECC
NGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSD
CCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECC
NYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTE
CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
TFRAELSKISGQTVTAGAVNAHAQVVIRVQ
HHHHHHHHCCCCEEEECEECCEEEEEEEEC
>Mature Secondary Structure 
GSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAA
CCCCCCCCCEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHHHHHHCCCC
DVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKG
CHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC
RRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGP
CEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECC
GITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCEEEEECC
NGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSD
CCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECC
NYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTE
CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
TFRAELSKISGQTVTAGAVNAHAQVVIRVQ
HHHHHHHHCCCCEEEECEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA