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The map label for this gene is yifE [H]

Identifier: 22124250

GI number: 22124250

Start: 367788

End: 368210

Strand: Direct

Name: yifE [H]

Synonym: y0333

Alternate gene names: 22124250

Gene position: 367788-368210 (Clockwise)

Preceding gene: 22124248

Following gene: 22124252

Centisome position: 7.99

GC content: 48.94

Gene sequence:

>423_bases
ATGTTTTGTTTTACACGCTGTCAAGCCTATCTAATACTCCGCGCCATAAACAGCACGACCATGAGAGAATTAGGAGCGTG
TCAGATGGCGGATAGCTTCATCACGACCAATCGTTTTTTTGATAATAAACATTATCCTCGCGGGTTCTCGCGTCACGGCG
ATTTCACCATTAAAGAGGCGCAATTACTAGAGCGCCATGGCTACGCTTTCAATGAGCTTGACTCAGGTAAACGTGAGCCA
GTAACGGAAGAAGAGCAACGGTTCGTTGCTGTTTGCCGTGGCGAGCGTGAACCGGTCAGTGCCGAGGAGAAGGTCTGGTC
TAAATATGTGATCCGGACTCGTCAGCCTAAACGTTTCCATACCCTGTCTGGCGGTAAGCCACAGATGGATGCTGTGGAGG
ATTATACCGATAGCGACGATTAA

Upstream 100 bases:

>100_bases
AGCTGCGCGACCAAAGTGACGAGTTCTACTGACCTCTAAAAAGGTTTTCAGTAATTCGGTATCCACACCATCTCCAATTT
TTTTTATCGTTAGGATTTAA

Downstream 100 bases:

>100_bases
TCTCCCTGCGTACTTGAAGCTGCAGGGTTGTTAGCTGCGTGCACTCACCCGAATCACTTACTGATGTAAGCTCATCGGGA
TTCGTTTACTGGCTGCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFCFTRCQAYLILRAINSTTMRELGACQMADSFITTNRFFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDSGKREP
VTEEEQRFVAVCRGEREPVSAEEKVWSKYVIRTRQPKRFHTLSGGKPQMDAVEDYTDSDD

Sequences:

>Translated_140_residues
MFCFTRCQAYLILRAINSTTMRELGACQMADSFITTNRFFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDSGKREP
VTEEEQRFVAVCRGEREPVSAEEKVWSKYVIRTRQPKRFHTLSGGKPQMDAVEDYTDSDD
>Mature_140_residues
MFCFTRCQAYLILRAINSTTMRELGACQMADSFITTNRFFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDSGKREP
VTEEEQRFVAVCRGEREPVSAEEKVWSKYVIRTRQPKRFHTLSGGKPQMDAVEDYTDSDD

Specific function: Unknown

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=112, Percent_Identity=83.0357142857143, Blast_Score=203, Evalue=3e-54,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 16342; Mature: 16342

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCFTRCQAYLILRAINSTTMRELGACQMADSFITTNRFFDNKHYPRGFSRHGDFTIKEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHH
QLLERHGYAFNELDSGKREPVTEEEQRFVAVCRGEREPVSAEEKVWSKYVIRTRQPKRFH
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE
TLSGGKPQMDAVEDYTDSDD
CCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MFCFTRCQAYLILRAINSTTMRELGACQMADSFITTNRFFDNKHYPRGFSRHGDFTIKEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHH
QLLERHGYAFNELDSGKREPVTEEEQRFVAVCRGEREPVSAEEKVWSKYVIRTRQPKRFH
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE
TLSGGKPQMDAVEDYTDSDD
CCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]