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The map label for this gene is 22124190

Identifier: 22124190

GI number: 22124190

Start: 290946

End: 292352

Strand: Reverse

Name: 22124190

Synonym: y0272

Alternate gene names: NA

Gene position: 292352-290946 (Counterclockwise)

Preceding gene: 22124191

Following gene: 22124188

Centisome position: 6.35

GC content: 53.52

Gene sequence:

>1407_bases
ATGTCATTGGTGAGGCATATGGATATCACGTCACAACATCCCTGGCATGTCTTGTTACAAGCCCCTTTGTCACCTGAGCA
GACCGCACAAGCCCTGGCCGATGATGACCCCCAATGGGAATATATCGACGGCCAGATGGTGAAACTGGGGTCATTGGCCC
ACGCCACGCTGAATATTGATGATATTCAGCAACAAGCCATGGCGCTGTTATCACAGAAAAGTAAAGACTTCCGGCTCGTG
GTGCATCTACTGCGCACCCTACAACACGGGGGCCAGCCAGATGAATTAATGCTGGCGATGTCGTTGCTGACCGAATACGT
CCAGCTATTTTGGACTACGGCCTGGCCGCAAAATCCTTTACACAAACGGCGCTTTGCTCAACAAATCCTAAAACGCTTTG
ACAGCGCCAGCAGCAGTTTTAGCCAACGAGCGGACGAGGCTCAACGTGAGAATGTGCAAGGATTATTGGCACATTTAGCA
CAGGTTTGGCATAGCCGTGAGCCGGGTCTGGCTAAAGAGGTGGATGCATTACGCAGCCGCTATGCGCGGCCACCGGAGCG
GGTTATCGAGGCAGTGGCTTCTGATGAACCGCTCTCATCCAACACCTTGGCGGCGGCAATGGCCGCCACCCCCGTTAGCC
CAAGCCTCGCCATAGATAACACGAGCGACAGAGCCTGGCGGCAGACCTTGCTGAAAATGGCGGATCTACTCAGCGAACAG
CAACCCGATGCCGCTATCGGTTTCCGGCTACGCCGCCATGCCGTATGGGGCGCGTTAACCGCACCACCTATGGCGCAGAG
CGATGGCCGCACCCCGTTAGCCGCGGTATCTGCGGATCGAACCGCCGATTACTTAGCACGTCTGGCTAATGCCGATTTGC
CTTTGTGGCACCAAGTGGAGCAGAGCCTCACCCTCGCGCCTTATTGGCTGGATGGACATGTGCTTTCGGCACAAATCGCC
CTGCAACTGGGTTATGACGCGGTGGCACAGGCTATCCGTGATGAACTCAGCGTTTTTTTAGCCCGTATTCCCGCATTAAA
AACCCTCTTTTTTACGGATATGACGCCATTCCTCTCCTCTGAATCTGCCGCCTGGTTACAGCAGGATGCGAATCATCAGG
GAAGAAGTCGCACTATTGAACAGGATGAAATTTGGCAATGCTATCAACAGCAAGGATTGGAAGCCGCACTACAGATGATA
AACCGGCAACCACAGCAATCCGAACCTCGGGACCGTTTTTACCATCAATTGCTCAGTGCACAGTTGTTCGAAAAAGCAGG
GTTAACCGCATTGGCGCAGCAGCACTACCACAGCTTATTACTGGTAGGGCAGCAATTACAGCTAAGCGAATGGGAACCTG
CGTTGATCGCTCTACTGACAGAAAAACAGCGACAACTCAAACCATGA

Upstream 100 bases:

>100_bases
CAGCGGAAACCCTGACCATCGAAGGGGCAAACGGTGCTTTTCCTCGGCTGACATTTACTCTTTCTCAGTTAACGCCAGCG
TTGAAACCGCTGCGTAACGC

Downstream 100 bases:

>100_bases
TCGCCATGGAATGCCACAGGAGCGTTAGCGCATGAAATTGCCGTTCTTTATACGCATAGCCAAGCCCGCCATTCCTCGCC
TTAAAGCGTCAATACCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Protein ImpA; Type VI Secretion-Associated Protein Family; ImpA Domain Protein; Type VI Secretion Protein VasJ; ImpA-Related Domain-Containing Protein

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSLVRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLV
VHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLA
QVWHSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQ
QPDAAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIA
LQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMI
NRQPQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP

Sequences:

>Translated_468_residues
MSLVRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLV
VHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLA
QVWHSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQ
QPDAAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIA
LQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMI
NRQPQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
>Mature_467_residues
SLVRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLVV
HLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQ
VWHSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQ
PDAAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIAL
QLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMIN
RQPQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52658; Mature: 52527

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNID
CCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHCCCHH
DIQQQAMALLSQKSKDFRLVVHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
HKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVWHSREPGLAKEVDALRSR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
YARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQ
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
QPDAAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHCCCCCHHHHHH
QSLTLAPYWLDGHVLSAQIALQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSS
HCCCCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
ESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQPQQSEPRDRFYHQLLSA
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLVRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNID
CCHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHCCCHH
DIQQQAMALLSQKSKDFRLVVHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
HKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVWHSREPGLAKEVDALRSR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
YARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQ
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
QPDAAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHCCCCCHHHHHH
QSLTLAPYWLDGHVLSAQIALQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSS
HCCCCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
ESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQPQQSEPRDRFYHQLLSA
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA