| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124176
Identifier: 22124176
GI number: 22124176
Start: 274302
End: 274724
Strand: Reverse
Name: 22124176
Synonym: y0256
Alternate gene names: NA
Gene position: 274724-274302 (Counterclockwise)
Preceding gene: 22124177
Following gene: 22124175
Centisome position: 5.97
GC content: 51.3
Gene sequence:
>423_bases ATGTATTACTTCAACGAGGGTTCCCTCGAGTTGCCTGAGGCATGGCGCGATATGACGGTAAATGTGCTGACATCGTCTCT GGATGAAACGGTGGGGTTAAGTTTTACGGTGTCGCGGGATACGCCCCCGTGGGGAATGGGGTTTCATGAGTTCTTTGACC GGGAAATAGGCTCTCTGAGCCGGCAATTAAATCACTATCAGTTACTGCATCAGGACACCGGTGAAGTCAATAATCACCCG TCAGTGACGGCCGAGTTTTGCTGGTCATCAGAGCAGGGACGGATACACCAGCTTATGACGCTGGTCGATATCGCCCCCCG TGTCTTGATATTAACCGCCACCATGGTCGGTGAATTAACCCCGCAGCAAAAAGAACATATCACGGCGATAGTGCAGACGT TGCAAATAAACGCGCGGTCATAA
Upstream 100 bases:
>100_bases TTATTCTGCAATTTTCTGGCTCTACCTCTATTACGCTGAATGCCGCCAATATTGACGCCATCGCGCCATTGATTAACTTA AATAAAGACAAGGGATAAGC
Downstream 100 bases:
>100_bases TTTACGGTCGTTTCGGATAGAGCCACGGCATCAGGAGGATGTTTATGACTGTCGCACAAAGTATTGGCACCGGGTATGGC GCGGCTGGCGCGCAATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MYYFNEGSLELPEAWRDMTVNVLTSSLDETVGLSFTVSRDTPPWGMGFHEFFDREIGSLSRQLNHYQLLHQDTGEVNNHP SVTAEFCWSSEQGRIHQLMTLVDIAPRVLILTATMVGELTPQQKEHITAIVQTLQINARS
Sequences:
>Translated_140_residues MYYFNEGSLELPEAWRDMTVNVLTSSLDETVGLSFTVSRDTPPWGMGFHEFFDREIGSLSRQLNHYQLLHQDTGEVNNHP SVTAEFCWSSEQGRIHQLMTLVDIAPRVLILTATMVGELTPQQKEHITAIVQTLQINARS >Mature_140_residues MYYFNEGSLELPEAWRDMTVNVLTSSLDETVGLSFTVSRDTPPWGMGFHEFFDREIGSLSRQLNHYQLLHQDTGEVNNHP SVTAEFCWSSEQGRIHQLMTLVDIAPRVLILTATMVGELTPQQKEHITAIVQTLQINARS
Specific function: Unknown
COG id: COG5435
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15920; Mature: 15920
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYFNEGSLELPEAWRDMTVNVLTSSLDETVGLSFTVSRDTPPWGMGFHEFFDREIGSLS CEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHH RQLNHYQLLHQDTGEVNNHPSVTAEFCWSSEQGRIHQLMTLVDIAPRVLILTATMVGELT HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PQQKEHITAIVQTLQINARS CCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYYFNEGSLELPEAWRDMTVNVLTSSLDETVGLSFTVSRDTPPWGMGFHEFFDREIGSLS CEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHH RQLNHYQLLHQDTGEVNNHPSVTAEFCWSSEQGRIHQLMTLVDIAPRVLILTATMVGELT HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PQQKEHITAIVQTLQINARS CCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA