| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124157
Identifier: 22124157
GI number: 22124157
Start: 251819
End: 253114
Strand: Direct
Name: 22124157
Synonym: y0237
Alternate gene names: NA
Gene position: 251819-253114 (Clockwise)
Preceding gene: 161484912
Following gene: 22124160
Centisome position: 5.47
GC content: 44.68
Gene sequence:
>1296_bases ATGAAGGGGAAGCGTGCCGTTGGGGTCGTAGGAATCACAGCCCATTTCATTCTGTGGTTTAATCGCTCAAATGTTGCATT GATACCGTTTTTTGAAGGACCAAGCATAATGAAATCGTTAATACTCCTCTTAGCATTACTGATACCCGCCAGTGTAACGG CAAATACCCTCTCGGTTGAGCCTAAGGATACCAAACCAGCCCTGATCGATTCGTTATCAGCCACTTTTGCGATTGATAAA ATCGCGATGTTAAAAAAGGAAAAAGGCGCAAATGAATCCAATCTGTACCTGCCTTTTGAACAAACAAAAGACGGTTTGGC GATCTTATTTGGTGATATCAATCAAGATGGCAAAATCGACGCGTTAGTCCCCTTTACCTGGGAAGGCCTCAATGGTCTTG ACCAAGAAATACCCTCTAACGACTGGTACAGCTATTACGCCATTTATCTTCAGGATGACCAAGGCTGGAAACAGGTAGGG CAAATCCCGACAGGCACCTTTACCACGGATAATCAGACGCTATTAACCAACATTGAGGACGGGGTCATTTACGGGGAGAT CATGCCACGTATGACGGATGATGACCCACAACCTCAACAGTGGGTATTACGTGCGCATCCAGAAAAAGACAATCTTCTTG TTCCTATCCCAACACCGCAGCCACTCGCTAACGCCCTGACTCTTAATCTGAGCAAAAAGCGGCCATTAACGCGAAATGCG TTAGTCACCGCCTTTGGTGAACCCATCAATATTGGTGACAATTATTTCTTAGTAGACGGAGATTGTGTTGGGCACCCAGA CTGGAAATATTACCAATACCCCGGAGCCGCTTTTAATGTCAGCCAGAATGATAACAGTGTTGGAGTCAGTCACTTTATTG GCATTCCTGACAACCTGAGTTTAGTGCTGGGTGATCTTACTATCACTCAGAAAACCTCTGCACATCAATTAATTAAAGCA TTATCTCAAAATGACAGTTTTACCGTTTCCCGTACCAGCACCGATTTGCGAACAGATCTGGGGCAATCATCACCTTACTT TGACGATGCAAACGATATTTTCGCTCTGCGCCTGCCTTACTACATCGCTGGATTTGAGGCTTGGGCAAAGAAAAATGAAG CCAGAGAAGTACCCAATGATGAAGAAGCAGACACATTCACCCGACAATTTTATTTCACCACGACAATTGGTGTGGCCCCA ATTCAGAACAGCCCAACACGGCTGATGTTTTATTTCTTAGGGGACAAAATGGTAGCACTCAGTGTTATTTATGATGACGG TCAGGTTTGTATCTAA
Upstream 100 bases:
>100_bases CTTTGGTTACACCGCCGCTTTAAAACCCGACCCATTGGCGAACCTTCGCTGTATTAATTTCACTTATTTATGTGAAAAAT CAGACGGCTGACAAAGTCAA
Downstream 100 bases:
>100_bases ACAGCCCAAACAGGCACGCTTACGGACATAACTCAGCATTTTCTCTTTTCAGGGTTATGTCTGTTAGGCCATAATCACCC CCCTCTAATAAGCCCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKGKRAVGVVGITAHFILWFNRSNVALIPFFEGPSIMKSLILLLALLIPASVTANTLSVEPKDTKPALIDSLSATFAIDK IAMLKKEKGANESNLYLPFEQTKDGLAILFGDINQDGKIDALVPFTWEGLNGLDQEIPSNDWYSYYAIYLQDDQGWKQVG QIPTGTFTTDNQTLLTNIEDGVIYGEIMPRMTDDDPQPQQWVLRAHPEKDNLLVPIPTPQPLANALTLNLSKKRPLTRNA LVTAFGEPINIGDNYFLVDGDCVGHPDWKYYQYPGAAFNVSQNDNSVGVSHFIGIPDNLSLVLGDLTITQKTSAHQLIKA LSQNDSFTVSRTSTDLRTDLGQSSPYFDDANDIFALRLPYYIAGFEAWAKKNEAREVPNDEEADTFTRQFYFTTTIGVAP IQNSPTRLMFYFLGDKMVALSVIYDDGQVCI
Sequences:
>Translated_431_residues MKGKRAVGVVGITAHFILWFNRSNVALIPFFEGPSIMKSLILLLALLIPASVTANTLSVEPKDTKPALIDSLSATFAIDK IAMLKKEKGANESNLYLPFEQTKDGLAILFGDINQDGKIDALVPFTWEGLNGLDQEIPSNDWYSYYAIYLQDDQGWKQVG QIPTGTFTTDNQTLLTNIEDGVIYGEIMPRMTDDDPQPQQWVLRAHPEKDNLLVPIPTPQPLANALTLNLSKKRPLTRNA LVTAFGEPINIGDNYFLVDGDCVGHPDWKYYQYPGAAFNVSQNDNSVGVSHFIGIPDNLSLVLGDLTITQKTSAHQLIKA LSQNDSFTVSRTSTDLRTDLGQSSPYFDDANDIFALRLPYYIAGFEAWAKKNEAREVPNDEEADTFTRQFYFTTTIGVAP IQNSPTRLMFYFLGDKMVALSVIYDDGQVCI >Mature_431_residues MKGKRAVGVVGITAHFILWFNRSNVALIPFFEGPSIMKSLILLLALLIPASVTANTLSVEPKDTKPALIDSLSATFAIDK IAMLKKEKGANESNLYLPFEQTKDGLAILFGDINQDGKIDALVPFTWEGLNGLDQEIPSNDWYSYYAIYLQDDQGWKQVG QIPTGTFTTDNQTLLTNIEDGVIYGEIMPRMTDDDPQPQQWVLRAHPEKDNLLVPIPTPQPLANALTLNLSKKRPLTRNA LVTAFGEPINIGDNYFLVDGDCVGHPDWKYYQYPGAAFNVSQNDNSVGVSHFIGIPDNLSLVLGDLTITQKTSAHQLIKA LSQNDSFTVSRTSTDLRTDLGQSSPYFDDANDIFALRLPYYIAGFEAWAKKNEAREVPNDEEADTFTRQFYFTTTIGVAP IQNSPTRLMFYFLGDKMVALSVIYDDGQVCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47882; Mature: 47882
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKRAVGVVGITAHFILWFNRSNVALIPFFEGPSIMKSLILLLALLIPASVTANTLSVE CCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEC PKDTKPALIDSLSATFAIDKIAMLKKEKGANESNLYLPFEQTKDGLAILFGDINQDGKID CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCEE ALVPFTWEGLNGLDQEIPSNDWYSYYAIYLQDDQGWKQVGQIPTGTFTTDNQTLLTNIED EEECEEECCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHCCCCCCEEECCCCEEEEECCC GVIYGEIMPRMTDDDPQPQQWVLRAHPEKDNLLVPIPTPQPLANALTLNLSKKRPLTRNA CEEEEEECCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCE LVTAFGEPINIGDNYFLVDGDCVGHPDWKYYQYPGAAFNVSQNDNSVGVSHFIGIPDNLS EEEECCCCEECCCCEEEECCCCCCCCCCCEEECCCCEEEECCCCCCCCCEEEECCCCCCE LVLGDLTITQKTSAHQLIKALSQNDSFTVSRTSTDLRTDLGQSSPYFDDANDIFALRLPY EEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCC YIAGFEAWAKKNEAREVPNDEEADTFTRQFYFTTTIGVAPIQNSPTRLMFYFLGDKMVAL EEECHHHHHCCCHHHCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCEEEE SVIYDDGQVCI EEEECCCCEEC >Mature Secondary Structure MKGKRAVGVVGITAHFILWFNRSNVALIPFFEGPSIMKSLILLLALLIPASVTANTLSVE CCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEC PKDTKPALIDSLSATFAIDKIAMLKKEKGANESNLYLPFEQTKDGLAILFGDINQDGKID CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCEE ALVPFTWEGLNGLDQEIPSNDWYSYYAIYLQDDQGWKQVGQIPTGTFTTDNQTLLTNIED EEECEEECCCCCHHHHCCCCCCEEEEEEEEECCCCHHHHCCCCCCEEECCCCEEEEECCC GVIYGEIMPRMTDDDPQPQQWVLRAHPEKDNLLVPIPTPQPLANALTLNLSKKRPLTRNA CEEEEEECCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCE LVTAFGEPINIGDNYFLVDGDCVGHPDWKYYQYPGAAFNVSQNDNSVGVSHFIGIPDNLS EEEECCCCEECCCCEEEECCCCCCCCCCCEEECCCCEEEECCCCCCCCCEEEECCCCCCE LVLGDLTITQKTSAHQLIKALSQNDSFTVSRTSTDLRTDLGQSSPYFDDANDIFALRLPY EEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCC YIAGFEAWAKKNEAREVPNDEEADTFTRQFYFTTTIGVAPIQNSPTRLMFYFLGDKMVAL EEECHHHHHCCCHHHCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCEEEE SVIYDDGQVCI EEEECCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA