| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124090
Identifier: 22124090
GI number: 22124090
Start: 175412
End: 176056
Strand: Reverse
Name: 22124090
Synonym: y0170
Alternate gene names: NA
Gene position: 176056-175412 (Counterclockwise)
Preceding gene: 22124091
Following gene: 22124089
Centisome position: 3.83
GC content: 41.55
Gene sequence:
>645_bases ATGATTATGCCGGTATTGATTCGGGGAAGTTCAAATATGATTGTTATGCCAAGTACTTATAGTCCAGCGACAATTGCTAG AGAATTTAAGGTCATTCATGAATTTGAATTGTCTAGCATGAAATATGGTGTGATTTTCGATAAAAATGTCCCTAAAGCGG CCATTATCCGTATGAATACGGAAAGTTTTAATGGTATACCGCGTCACCGGATTATCGCGGCTCTTGATCTGGTTGCGAAG CAAGAGTTAGGTGAAAACGTTATTTCTGTTCAGCGCTTTTGGCAAGATTCTGCTCTTTTTCAAGTGGAAGGAATGGTGGT TGAACAGGGGGCGCGTGGCAAAGGGTTGGCTACATTACTTTATGAAGAATTAGTCGTTAAGTGTGGCGTGATTTTAATGA GTGATAATAAACAATATGAAGCCGGTAAGGCGCTGTGGCAGAAGATTGCTCAAGAATCGGACAAGCTGGCGGTGTTTATA TTAGATTCTGACGTTGGTCAGTTTTACCCTTATTGTGGTGATCGCGTTCCCTATAATGGTAAAGGCATTCCTGAAGAAAA AATTTGGAGCCTGCATCCAGATACCACCAAATGGGGCGTGGTTTTGGTCGCTGAGAATAGAGAGAAAATATCGCAGTATT GTTGA
Upstream 100 bases:
>100_bases TCTCTTTCACCCGAATCACTTACTGCAGTAAGCTCATCGGGACTCTCTCGCTTGCCGCCTTCCTGCAACTCGAATTATTT AGGGTATATAGTCAAAAGAA
Downstream 100 bases:
>100_bases TAAATGAGTAAGTCTGCTACTGTTTCCAACTCTTGCTGTCTGCTCATCGCTAAGGTTGTCGGTGTACGCTTTTAATCTAC TTCCCCCTCCCTTATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIMPVLIRGSSNMIVMPSTYSPATIAREFKVIHEFELSSMKYGVIFDKNVPKAAIIRMNTESFNGIPRHRIIAALDLVAK QELGENVISVQRFWQDSALFQVEGMVVEQGARGKGLATLLYEELVVKCGVILMSDNKQYEAGKALWQKIAQESDKLAVFI LDSDVGQFYPYCGDRVPYNGKGIPEEKIWSLHPDTTKWGVVLVAENREKISQYC
Sequences:
>Translated_214_residues MIMPVLIRGSSNMIVMPSTYSPATIAREFKVIHEFELSSMKYGVIFDKNVPKAAIIRMNTESFNGIPRHRIIAALDLVAK QELGENVISVQRFWQDSALFQVEGMVVEQGARGKGLATLLYEELVVKCGVILMSDNKQYEAGKALWQKIAQESDKLAVFI LDSDVGQFYPYCGDRVPYNGKGIPEEKIWSLHPDTTKWGVVLVAENREKISQYC >Mature_214_residues MIMPVLIRGSSNMIVMPSTYSPATIAREFKVIHEFELSSMKYGVIFDKNVPKAAIIRMNTESFNGIPRHRIIAALDLVAK QELGENVISVQRFWQDSALFQVEGMVVEQGARGKGLATLLYEELVVKCGVILMSDNKQYEAGKALWQKIAQESDKLAVFI LDSDVGQFYPYCGDRVPYNGKGIPEEKIWSLHPDTTKWGVVLVAENREKISQYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24092; Mature: 24092
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMPVLIRGSSNMIVMPSTYSPATIAREFKVIHEFELSSMKYGVIFDKNVPKAAIIRMNT CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEC ESFNGIPRHRIIAALDLVAKQELGENVISVQRFWQDSALFQVEGMVVEQGARGKGLATLL CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECEEEECCCCCCCHHHHH YEELVVKCGVILMSDNKQYEAGKALWQKIAQESDKLAVFILDSDVGQFYPYCGDRVPYNG HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCCCCCCC KGIPEEKIWSLHPDTTKWGVVLVAENREKISQYC CCCCHHHEEECCCCCCCEEEEEEECCHHHHHHCC >Mature Secondary Structure MIMPVLIRGSSNMIVMPSTYSPATIAREFKVIHEFELSSMKYGVIFDKNVPKAAIIRMNT CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEC ESFNGIPRHRIIAALDLVAKQELGENVISVQRFWQDSALFQVEGMVVEQGARGKGLATLL CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECEEEECCCCCCCHHHHH YEELVVKCGVILMSDNKQYEAGKALWQKIAQESDKLAVFILDSDVGQFYPYCGDRVPYNG HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCCCCCCC KGIPEEKIWSLHPDTTKWGVVLVAENREKISQYC CCCCHHHEEECCCCCCCEEEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA