Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is 22124040

Identifier: 22124040

GI number: 22124040

Start: 129011

End: 129391

Strand: Reverse

Name: 22124040

Synonym: y0120

Alternate gene names: NA

Gene position: 129391-129011 (Counterclockwise)

Preceding gene: 22124041

Following gene: 22124037

Centisome position: 2.81

GC content: 50.66

Gene sequence:

>381_bases
ATGCTGTTCAAATTGGTTCCAGACCAATTTTTCTCTCGCTTGCCGTCTGCCTGCAACTCGAATTATTTGGGTATAGCTCG
GTATCAATTGGAAAATAAACATCAATCCGTATTGAAAGCGTTGGGTAGCCATTCTAACTGGTTACCGGTTATCGCCACTA
CATCAAAACGACAGGATGTTGTGGCAAAACTGGCGCCGCGTTGTGCCAGCCAAACAGCGGCGGCCAGATGTAGCCGTTGT
TGCTTGCGCGGGGTGATACTGGCGGCTGCACCACCAAACAGGTCATTGCGCCGAAAGCGAACCTCGACGAATACCCATGC
ATCCCCATCACGCATAATAAGGTCAATTTCGCCTCCACGGAAGGCAACATTGGCCGCTTGA

Upstream 100 bases:

>100_bases
TCAATAACCCGAATCACTTACTGGTCGTTGACTTTAAAGTCAGTAAGCTCATCGGAATTAATGAGCCTTATCCCTGAGGC
CCACCCTGCGGACAGCATAA

Downstream 100 bases:

>100_bases
AAAACGAGACCTGCTCGCTCCAGATGGCGACGAGCCAGGTTTTCGTAATGTGCGCCAGTATCCCGTTGGCTCATCGATAG
TCCCTAAAATCCTTAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLFKLVPDQFFSRLPSACNSNYLGIARYQLENKHQSVLKALGSHSNWLPVIATTSKRQDVVAKLAPRCASQTAAARCSRC
CLRGVILAAAPPNRSLRRKRTSTNTHASPSRIIRSISPPRKATLAA

Sequences:

>Translated_126_residues
MLFKLVPDQFFSRLPSACNSNYLGIARYQLENKHQSVLKALGSHSNWLPVIATTSKRQDVVAKLAPRCASQTAAARCSRC
CLRGVILAAAPPNRSLRRKRTSTNTHASPSRIIRSISPPRKATLAA
>Mature_126_residues
MLFKLVPDQFFSRLPSACNSNYLGIARYQLENKHQSVLKALGSHSNWLPVIATTSKRQDVVAKLAPRCASQTAAARCSRC
CLRGVILAAAPPNRSLRRKRTSTNTHASPSRIIRSISPPRKATLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13811; Mature: 13811

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKLVPDQFFSRLPSACNSNYLGIARYQLENKHQSVLKALGSHSNWLPVIATTSKRQDV
CCCEECHHHHHHHCHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
VAKLAPRCASQTAAARCSRCCLRGVILAAAPPNRSLRRKRTSTNTHASPSRIIRSISPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC
KATLAA
CCCCCC
>Mature Secondary Structure
MLFKLVPDQFFSRLPSACNSNYLGIARYQLENKHQSVLKALGSHSNWLPVIATTSKRQDV
CCCEECHHHHHHHCHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
VAKLAPRCASQTAAARCSRCCLRGVILAAAPPNRSLRRKRTSTNTHASPSRIIRSISPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC
KATLAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA