| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is gltS [H]
Identifier: 22124026
GI number: 22124026
Start: 114221
End: 115435
Strand: Reverse
Name: gltS [H]
Synonym: y0106
Alternate gene names: 22124026
Gene position: 115435-114221 (Counterclockwise)
Preceding gene: 22124029
Following gene: 22124020
Centisome position: 2.51
GC content: 50.04
Gene sequence:
>1215_bases ATGTTTCATCTCGATACCTATGGCACGCTAGTTGCGGCCTGTCTGGTTTTACTGTTAGGCCGAAAACTTGTACAAACCGT CCCTTTCCTAAAGAAATACACTATCCCTGAACCCGTAGCCGGTGGTTTGCTGGTGGCTTTTATGATGCTTCTGGTACAGA AGACGCTGGGCTGGGAAGTCAGTTTTGATATGTCTCTGAAAGACCCTCTGATGCTAGCCTTCTTTGCCACGATAGGTTTG AACGCCAACTTGGCCAGTTTACGGGCTGGAGGTAAGGCTCTGAGCATATTTGTCTTTATCGTTGTTGGCTTACTGCTGGT GCAAAACACGATTGGGATTGTGCTGGCTAAATTGATGGGGCTGGATCCCTTAATGGGTCTCTTGGCTGGGTCCATCACAT TATCGGGTGGGCACGGCACTGGTGCTGCGTGGAGTAAATTATTCTCTGAGCGTTACGGATTTGAAAACGCAACAGAAGTT GCCATGGCTTGTGCAACCTTTGGTTTGGTATTGGGTGGGTTGATTGGTGGCCCGGTCGCTCGTTATCTGGTGAAGCACTC TTCCACGCCAGAGGGTACCCCAGATGATAGCGCCGTCCCCTCTGCTTTTGAGAAGCCCTCTGCTGGCCGTATGATCACAT CACTGGTGTTGATAGAAACCATCGCCATGATCTCTATTTGCCTGATGGCCGGTAATCTGATTGCAGGTTGGTTGCAAGGG ACGATGTTCGAGTTACCGATCTTTGTTTGCGTACTATTTGTCGGAGTAATCCTTAGCAATACGCTGTCAGCCAGCGGCTT CTATAGAGTCTTTGACCGTGCGGTATCCGTGTTGGGGAATGTCAGTTTATCATTGTTCCTGGCCATGGCGCTGATGAGCC TGAAGCTGTGGGAGCTGGCTTCATTAGCATTACCGATGTTGGTGATTTTGTCGGTACAGGCGTTGGCCATGGCACTGTAC GCGATATTTGTCACCTACCGTATCATGGGCAAAAACTATGATGCAGCGGTATTAGCGGCAGGACACTGTGGCTTCGGTTT GGGGGCTACGCCAACCGCGATTGCCAATATGCAAGCCATCACCGACCGGTTTGGCCCATCTCATTTGGCGTTCTTGGTGG TTCCGATGGTTGGCGCGTTCTTTATTGATATCGTCAATGCGATTGTGATCAAGCTTTATCTGTTGTTGCCAATATTTCCA GCCGTAACGGGGTGA
Upstream 100 bases:
>100_bases CATTTTTTTTTCTAATCCTCTCTTCTATTACTTTGGCGTTTTTTAAGGAACTGTCTAACGTCATATTTTTATTAGATATT TTATTGCATGGAGTACCAAG
Downstream 100 bases:
>100_bases TAGCTCCGTCATGCTGCGGGTAGCATATACGTTAGTTATCCTCGCTCACACCAGTTACTTTCTTATGTGAGTGGCTGGGA ATTAAGAAGCCTCATGAATG
Product: sodium/glutamate symport carrier protein
Products: Na (I) [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate permease [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MFHLDTYGTLVAACLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVAFMMLLVQKTLGWEVSFDMSLKDPLMLAFFATIGL NANLASLRAGGKALSIFVFIVVGLLLVQNTIGIVLAKLMGLDPLMGLLAGSITLSGGHGTGAAWSKLFSERYGFENATEV AMACATFGLVLGGLIGGPVARYLVKHSSTPEGTPDDSAVPSAFEKPSAGRMITSLVLIETIAMISICLMAGNLIAGWLQG TMFELPIFVCVLFVGVILSNTLSASGFYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLVILSVQALAMALY AIFVTYRIMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLLLPIFP AVTG
Sequences:
>Translated_404_residues MFHLDTYGTLVAACLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVAFMMLLVQKTLGWEVSFDMSLKDPLMLAFFATIGL NANLASLRAGGKALSIFVFIVVGLLLVQNTIGIVLAKLMGLDPLMGLLAGSITLSGGHGTGAAWSKLFSERYGFENATEV AMACATFGLVLGGLIGGPVARYLVKHSSTPEGTPDDSAVPSAFEKPSAGRMITSLVLIETIAMISICLMAGNLIAGWLQG TMFELPIFVCVLFVGVILSNTLSASGFYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLVILSVQALAMALY AIFVTYRIMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLLLPIFP AVTG >Mature_404_residues MFHLDTYGTLVAACLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVAFMMLLVQKTLGWEVSFDMSLKDPLMLAFFATIGL NANLASLRAGGKALSIFVFIVVGLLLVQNTIGIVLAKLMGLDPLMGLLAGSITLSGGHGTGAAWSKLFSERYGFENATEV AMACATFGLVLGGLIGGPVARYLVKHSSTPEGTPDDSAVPSAFEKPSAGRMITSLVLIETIAMISICLMAGNLIAGWLQG TMFELPIFVCVLFVGVILSNTLSASGFYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLVILSVQALAMALY AIFVTYRIMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLLLPIFP AVTG
Specific function: Catalyzes the sodium-dependent uptake of extracellular glutamate [H]
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gltS symporter family [H]
Homologues:
Organism=Escherichia coli, GI1790085, Length=399, Percent_Identity=82.4561403508772, Blast_Score=598, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004445 [H]
Pfam domain/function: PF03616 Glt_symporter [H]
EC number: NA
Molecular weight: Translated: 42726; Mature: 42726
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLDTYGTLVAACLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVAFMMLLVQKTLGWEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCE SFDMSLKDPLMLAFFATIGLNANLASLRAGGKALSIFVFIVVGLLLVQNTIGIVLAKLMG EECCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPLMGLLAGSITLSGGHGTGAAWSKLFSERYGFENATEVAMACATFGLVLGGLIGGPVA CHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYLVKHSSTPEGTPDDSAVPSAFEKPSAGRMITSLVLIETIAMISICLMAGNLIAGWLQG HHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMFELPIFVCVLFVGVILSNTLSASGFYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALPMLVILSVQALAMALYAIFVTYRIMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHH TDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLLLPIFPAVTG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFHLDTYGTLVAACLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVAFMMLLVQKTLGWEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCE SFDMSLKDPLMLAFFATIGLNANLASLRAGGKALSIFVFIVVGLLLVQNTIGIVLAKLMG EECCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPLMGLLAGSITLSGGHGTGAAWSKLFSERYGFENATEVAMACATFGLVLGGLIGGPVA CHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYLVKHSSTPEGTPDDSAVPSAFEKPSAGRMITSLVLIETIAMISICLMAGNLIAGWLQG HHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMFELPIFVCVLFVGVILSNTLSASGFYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALPMLVILSVQALAMALYAIFVTYRIMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHH TDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLLLPIFPAVTG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-glutamate [Periplasm] = Na (I) [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2254324; 2017136; 7686882; 9278503; 1544582 [H]