| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is pfkA [H]
Identifier: 22123980
GI number: 22123980
Start: 72108
End: 73091
Strand: Reverse
Name: pfkA [H]
Synonym: y0059
Alternate gene names: 22123980
Gene position: 73091-72108 (Counterclockwise)
Preceding gene: 22123981
Following gene: 22123979
Centisome position: 1.59
GC content: 47.15
Gene sequence:
>984_bases ATGGTTAAGAAAATTGGTGTCCTAACAAGTGGTGGTGATGCACCCGGTATGAATGCTGCTATTCGCGGGGTTGTTCGTGC CGCTTTGTCAGCAGGGTTAGACGTTTTCGGTATTGAAGATGGCTATCTTGGCTTATATGAAAATCGTATGAAGAAGCTGG ATCGCTATAGCGTGTCAGATATGATTAACCGTGGCGGTACTTTCCTCGGATCTGCTCGTTTCCCAGAATTCCGCGATCCG GAAGTGCGTAAAGTTGCCCTCAAGAATATGCATGAGCGTGGCATTGATGGCTTGGTTGTTATCGGTGGTGATGGTTCTTA TGCTGGTGCGGACCTGCTGACAAAAGAAGGGGGAATTCACTGTGTTGGTTTACCGGGCACTATCGATAACGATGTGGCGG GTACTGACTACACCATCGGTTTTTTCACCGCACTGGAAACGGTAGTGGAAGCCATTGACCGCTTACGCGATACCTCTTCT TCCCACCAACGTATCTCTATCGTGGAAGTGATGGGCCGCTATTGCGGTGATTTAACGTTGGCAGCCGCGATTGCCGGTGG TTGTGAGTTTATTGCGATCCCTGAAGTTGAATTTAAACGTGATGATCTGGTTGCTGAAATCAAAGCGGGCATCGCGAAAG GTAAAAAGCACGCGATTGTTGCTATTACTGAAAAGCTGGATGATATCGATTCATTGGCTAAGTACATTGAAAAAGAGACG GGCCGTGAAACTCGTGGCACCGTGTTAGGCCATATCCAACGTGGTGGTGCTCCGGTGGCTTATGACCGTATTCTTGCTTC CCGTATGGGGGCTTATGCTGTCGATTTGCTGTTACAGGACCACGATTACAAAAAAGGTGGTTTCTGCGTCGGTGTACAGA ATGAGAAGATGGTGCATGAGTTAATTTCTGTGTGTATCGCGCCAGAGAATAAGAAAAGTAAATTTAAAGAAGATTGGTAC GATACAGCGAAGAAACTGTTCTAA
Upstream 100 bases:
>100_bases TAATCCCATAAAGCTGATTTTCTGTACGGTCTCTTCCGTGCAAAGATAATCGGCAGATAAAGAATTCTACAAAATCGCAT TTACAAGTTCAGAGGTAGTC
Downstream 100 bases:
>100_bases AACGGCAACTCGCTCATTCATCAAGCCCTCGAAATTGAACTGATCCCAAAAAGTTGGGCAGTTTACATTACGAGGGCTTT TTACTTTCGGTCACCCCTAT
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MVKKIGVLTSGGDAPGMNAAIRGVVRAALSAGLDVFGIEDGYLGLYENRMKKLDRYSVSDMINRGGTFLGSARFPEFRDP EVRKVALKNMHERGIDGLVVIGGDGSYAGADLLTKEGGIHCVGLPGTIDNDVAGTDYTIGFFTALETVVEAIDRLRDTSS SHQRISIVEVMGRYCGDLTLAAAIAGGCEFIAIPEVEFKRDDLVAEIKAGIAKGKKHAIVAITEKLDDIDSLAKYIEKET GRETRGTVLGHIQRGGAPVAYDRILASRMGAYAVDLLLQDHDYKKGGFCVGVQNEKMVHELISVCIAPENKKSKFKEDWY DTAKKLF
Sequences:
>Translated_327_residues MVKKIGVLTSGGDAPGMNAAIRGVVRAALSAGLDVFGIEDGYLGLYENRMKKLDRYSVSDMINRGGTFLGSARFPEFRDP EVRKVALKNMHERGIDGLVVIGGDGSYAGADLLTKEGGIHCVGLPGTIDNDVAGTDYTIGFFTALETVVEAIDRLRDTSS SHQRISIVEVMGRYCGDLTLAAAIAGGCEFIAIPEVEFKRDDLVAEIKAGIAKGKKHAIVAITEKLDDIDSLAKYIEKET GRETRGTVLGHIQRGGAPVAYDRILASRMGAYAVDLLLQDHDYKKGGFCVGVQNEKMVHELISVCIAPENKKSKFKEDWY DTAKKLF >Mature_327_residues MVKKIGVLTSGGDAPGMNAAIRGVVRAALSAGLDVFGIEDGYLGLYENRMKKLDRYSVSDMINRGGTFLGSARFPEFRDP EVRKVALKNMHERGIDGLVVIGGDGSYAGADLLTKEGGIHCVGLPGTIDNDVAGTDYTIGFFTALETVVEAIDRLRDTSS SHQRISIVEVMGRYCGDLTLAAAIAGGCEFIAIPEVEFKRDDLVAEIKAGIAKGKKHAIVAITEKLDDIDSLAKYIEKET GRETRGTVLGHIQRGGAPVAYDRILASRMGAYAVDLLLQDHDYKKGGFCVGVQNEKMVHELISVCIAPENKKSKFKEDWY DTAKKLF
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI11321601, Length=311, Percent_Identity=40.8360128617363, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI266453768, Length=311, Percent_Identity=41.4790996784566, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI266453748, Length=311, Percent_Identity=41.4790996784566, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI4505749, Length=311, Percent_Identity=41.4790996784566, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI266453619, Length=311, Percent_Identity=41.4790996784566, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI48762920, Length=311, Percent_Identity=41.8006430868167, Blast_Score=208, Evalue=6e-54, Organism=Escherichia coli, GI1790350, Length=327, Percent_Identity=77.0642201834862, Blast_Score=501, Evalue=1e-143, Organism=Caenorhabditis elegans, GI25147584, Length=311, Percent_Identity=40.1929260450161, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17558788, Length=319, Percent_Identity=36.9905956112853, Blast_Score=187, Evalue=5e-48, Organism=Caenorhabditis elegans, GI72003601, Length=291, Percent_Identity=31.2714776632302, Blast_Score=134, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6321679, Length=311, Percent_Identity=42.443729903537, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6323861, Length=313, Percent_Identity=38.0191693290735, Blast_Score=185, Evalue=8e-48, Organism=Drosophila melanogaster, GI28573326, Length=312, Percent_Identity=42.3076923076923, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17647809, Length=311, Percent_Identity=42.1221864951768, Blast_Score=217, Evalue=9e-57, Organism=Drosophila melanogaster, GI24652337, Length=311, Percent_Identity=42.1221864951768, Blast_Score=217, Evalue=1e-56,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 35395; Mature: 35395
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKIGVLTSGGDAPGMNAAIRGVVRAALSAGLDVFGIEDGYLGLYENRMKKLDRYSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH MINRGGTFLGSARFPEFRDPEVRKVALKNMHERGIDGLVVIGGDGSYAGADLLTKEGGIH HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHEECCCCEE CVGLPGTIDNDVAGTDYTIGFFTALETVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHH AAAIAGGCEFIAIPEVEFKRDDLVAEIKAGIAKGKKHAIVAITEKLDDIDSLAKYIEKET HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHC GRETRGTVLGHIQRGGAPVAYDRILASRMGAYAVDLLLQDHDYKKGGFCVGVQNEKMVHE CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHH LISVCIAPENKKSKFKEDWYDTAKKLF HHHHHCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVKKIGVLTSGGDAPGMNAAIRGVVRAALSAGLDVFGIEDGYLGLYENRMKKLDRYSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH MINRGGTFLGSARFPEFRDPEVRKVALKNMHERGIDGLVVIGGDGSYAGADLLTKEGGIH HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHEECCCCEE CVGLPGTIDNDVAGTDYTIGFFTALETVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHH AAAIAGGCEFIAIPEVEFKRDDLVAEIKAGIAKGKKHAIVAITEKLDDIDSLAKYIEKET HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHC GRETRGTVLGHIQRGGAPVAYDRILASRMGAYAVDLLLQDHDYKKGGFCVGVQNEKMVHE CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHH LISVCIAPENKKSKFKEDWYDTAKKLF HHHHHCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA