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The map label for this gene is scpB [H]

Identifier: 221232610

GI number: 221232610

Start: 1833987

End: 1834556

Strand: Reverse

Name: scpB [H]

Synonym: SPN23F_18880

Alternate gene names: 221232610

Gene position: 1834556-1833987 (Counterclockwise)

Preceding gene: 221232611

Following gene: 221232609

Centisome position: 82.59

GC content: 44.56

Gene sequence:

>570_bases
ATGAGTACTTTAGCAAAAATAGAAGCGCTCTTGTTTGTAGCGGGTGAAGATGGGATTCGGGTCCGCCAGTTAGCTGAACT
CCTCTCTCTGCCACCGACAGGCATCCAGCAAAGTTTAGGAAAATTAGCCCAGAAGTATGAAAAGGACCCAGATTCCAGTT
TGGCTTTGATTGAGACAAGTGGTGCTTATAGATTGGTGACCAAGCCTCAATTTGCAGAGATTTTGAAGGAATACTCTAAG
GCGCCTATCAACCAGAGCTTGTCTCGGGCTGCCCTTGAGACCTTGTCCATTATTGCCTACAAACAGCCGATTACGCGGAT
AGAAATTGATGCCATCCGTGGAGTTAACTCGAGTGGAGCCTTGGCAAAGTTGCAGGCTTTTGACCTGATAAAGGAAGACG
GGAAAAAGGAAGTATTGGGGCGCCCCAACCTCTATGTGACTACGGATTATTTCCTAGATTACATGGGGATAAACCATTTA
GAAGAATTACCAGTGATTGATGAGCTTGAGATTCAAGCCCAAGAAAGCCAATTATTTGGTGAAAGGATAGAAGAAGATGA
GAATCAATAA

Upstream 100 bases:

>100_bases
GCTGATCCTCGTGCAAGAGGAGAGTTTTGGAGATATCTATCTCATGGAAAAGAAGGAAGAAAGTCAAGTGCCTCAAAGCT
AGACTTGATAGAGAGGAAAG

Downstream 100 bases:

>100_bases
GTATATTGCCCACGCAGGTGTGGCCAGTAGGAGAAAAGCAGAAGAGCTGATTAAGCAAGGCTTGGTGACGGTTAACGGCC
AAGTGGTGCGTGAACTAGCA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSTLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETSGAYRLVTKPQFAEILKEYSK
APINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGALAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHL
EELPVIDELEIQAQESQLFGERIEEDENQ

Sequences:

>Translated_189_residues
MSTLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETSGAYRLVTKPQFAEILKEYSK
APINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGALAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHL
EELPVIDELEIQAQESQLFGERIEEDENQ
>Mature_188_residues
STLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETSGAYRLVTKPQFAEILKEYSKA
PINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGALAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHLE
ELPVIDELEIQAQESQLFGERIEEDENQ

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 21038; Mature: 20907

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETS
CCHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
GAYRLVTKPQFAEILKEYSKAPINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGA
CCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
LAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHLEELPVIDELEIQAQESQLFG
HHHHHHHHHHHHCCCHHHCCCCCEEEEHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
ERIEEDENQ
HHHHCCCCC
>Mature Secondary Structure 
STLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETS
CHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
GAYRLVTKPQFAEILKEYSKAPINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGA
CCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
LAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHLEELPVIDELEIQAQESQLFG
HHHHHHHHHHHHCCCHHHCCCCCEEEEHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
ERIEEDENQ
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11763967 [H]