| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is trpD [H]
Identifier: 221232559
GI number: 221232559
Start: 1780885
End: 1781889
Strand: Reverse
Name: trpD [H]
Synonym: SPN23F_18350
Alternate gene names: 221232559
Gene position: 1781889-1780885 (Counterclockwise)
Preceding gene: 221232560
Following gene: 221232558
Centisome position: 80.22
GC content: 43.68
Gene sequence:
>1005_bases ATGAAAGAGATTATTGAAAAACTAGCAAAATTTGAAAATTTATCAGGTGTGGAAATGACGGATGTCATTGAGCGTATCGT AACTGGGCGTGTAACTGAAGCGCAGATTGCTTCTCTCCTCTTAGCTCTTAAGATGAAGGGGGAAACACCTGAAGAACGTA CAGCCATTGCCCAAGTCATGAGAGGACATGCCCAGCATATTCCAACTGAGATTCATGATGCTATGGACAACTGTGGTACA GGTGGGGACAAGTCTTTCAGTTTTAATATTTCCACAACTGCAGCCTTTGTCTTGGCTGGTGGCGGTATTCACATGGCCAA GCATGGTAACCGCTCGATTTCTTCTAAATCTGGTTCCGCAGATGTCCTCGAAGCCTTGGGAATCAATCTTGACCTCAAAC CAGCTGAACTAGGTAAGGTCTTTGATAAAACTGGAATCGTCTTTCTCTTCGCTAAAAATATGCACCCAGCTATGAAATAC ATCATGCCAGCTCGTTTGGAATTGGGAATTCCAACGATTATGAACTTGACTGGTCCACTGATTCATCCAATGGCTTTAGA AACACAGCTTCTTGGAATTAGTCGTCCAGAACTCCTAGAAAGTACAGCTCAGGTTTTGAAAAATATGGGTCGCAAACGTG CCATCGTGGTTGCTGGACCAGAAGGGTTGGATGAAGCTGGCTTGAACGGAACAACCAAGATTGCACTTCTTGAAAATGGC GAAATCAGCTTGTCAAGCTTTACTCCAGAGGATTTGGGAATGGAAGACTATGCTATGGAAGATATTCGTGGTGGGAATGC TCAGGAAAATGCAGAAATTTTGCTTAGCGTTCTGAAAAACGAAGCAAGTCCATTCTTGGAAACGACAGTCTTGAATGCTG GTCTTGGTTTCTATGCTAATGGTAAGATTGATAGCATCAAGGAAGGAGTTGCCTTGGCCCGTCAAGTGATTGCTAGAGGC AAGGCCCTTGAAAAACTCAGACTGTTACAGGAGTACCAAAAATGA
Upstream 100 bases:
>100_bases ATTTATGGCTTCCAGTACCATCCAGAGAGCATTGGAACGCCAGACGGCTTGTCTTCTATTCGGAATTTTATCGAGAAGGT TGTAAAGTGAGGAAACTAGG
Downstream 100 bases:
>100_bases GTCAGGAATTTTTAGCACGAATCTTAGAGCAGAAGGCGCGTGAGGTGGAGCAGATGAAGCTGGAGCAAATCCAGCCTCTG CGCCAGACCTATCGCTTGGC
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVMRGHAQHIPTEIHDAMDNCGT GGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKY IMPARLELGIPTIMNLTGPLIHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENG EISLSSFTPEDLGMEDYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYANGKIDSIKEGVALARQVIARG KALEKLRLLQEYQK
Sequences:
>Translated_334_residues MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVMRGHAQHIPTEIHDAMDNCGT GGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKY IMPARLELGIPTIMNLTGPLIHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENG EISLSSFTPEDLGMEDYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYANGKIDSIKEGVALARQVIARG KALEKLRLLQEYQK >Mature_334_residues MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVMRGHAQHIPTEIHDAMDNCGT GGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKY IMPARLELGIPTIMNLTGPLIHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENG EISLSSFTPEDLGMEDYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYANGKIDSIKEGVALARQVIARG KALEKLRLLQEYQK
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=279, Percent_Identity=39.7849462365591, Blast_Score=186, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320561, Length=268, Percent_Identity=30.2238805970149, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 35963; Mature: 35963
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVM CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSA HHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHEEEEEECCCEEEECCCCCCCCCCCCCH DVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPARLELGIPTIMNLTGPL HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCH IHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENG HCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC EISLSSFTPEDLGMEDYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYAN CEEECCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEC GKIDSIKEGVALARQVIARGKALEKLRLLQEYQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVM CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSA HHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHEEEEEECCCEEEECCCCCCCCCCCCCH DVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPARLELGIPTIMNLTGPL HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCH IHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENG HCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC EISLSSFTPEDLGMEDYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYAN CEEECCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEC GKIDSIKEGVALARQVIARGKALEKLRLLQEYQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA