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The map label for this gene is secY [H]

Identifier: 221232500

GI number: 221232500

Start: 1707856

End: 1709073

Strand: Reverse

Name: secY [H]

Synonym: SPN23F_17720

Alternate gene names: 221232500

Gene position: 1709073-1707856 (Counterclockwise)

Preceding gene: 221232501

Following gene: 221232499

Centisome position: 76.94

GC content: 36.54

Gene sequence:

>1218_bases
ATGACTAAGATTTATTCGTCTATAACAGTAAAAAAAGGATTATTTACCTTATTTCTACTGTTTATCTATGTATTGGGAAG
TCGTATTACTCTCCCTTTTGTTGATTTGAATTCCAAAGATTTCTTAGGTGGTTCAACAGCCTACCTAGCTTTTTCAGCAG
CCCTTACAGGTGGAAATCTAAGAAGTTTGTCAATTTTTTCTGTTGGATTATCCCCTTGGATGTCAGCTATGATTTTGTGG
CAGATGTTTTCATATTCTAAAAAATTGGGGCTAAGTTCTACAGCGATTGAAATTCAAGATCGTCGAAGAATGTATCTGAC
CTTGCTAATTGCTGTGATTCAATCCTTGGCAGTTAGCTTGAGCTTGCCAGTACAATCCTCCTACTCGGTAATTTTGGTTG
TTCTAATGAATACCTTGTTGCTGATAGCAGGAACAATTTTTCTGGTTTGGTTGTCAGATTTAAATGCTAGCATGGGAATT
GGGGGTTCTATTGTAATCCTCCTATCCAGCATTGTTTTAAATATCCCTCAGGATGTTATTGAAACTTTTAAACTGGTTCA
TATCCCTACAGGGATTGTTCTCTTGCTTGTTTTTATGACCATTATATTTTCTTACTTGCTTGCCCTTATGTATCGAGCTC
GCTATTTGGTTCCTGTTAATAAAATTGGCTTACACAATCGATTTAAACGCTATTCTTATCTCGAAATCATGTTGAATCCT
GCAGGTGGGATGCCTTATATGTATGTGATGAGTTTTCTTAGTGTACCAGCTTATTTGTTCACCTTGTTGGGATTTATTTT
CCCTAATCATTCAGGGCTAGCGGCTTTATCAAAGGAATTTATGGTTGGTAAGCCTTTGTGGGTCTATGTTTATATTTCGG
TCTTATTTTTATTTAGTATCATTTTTGCTTTTGTTACGATGAATGGAGAAGAGATTGCAGACCGTATGAAAAAATCTGGA
GAATACATTTATGGTATTTATCCAGGTGCGGATACTAGTCGATTTATTAATCGATTGGTCCTTCGTTTCTCAGTCATAGG
TGGTCTCTTTAATGTGGTTATGGCAGGTGGTCCCATGCTTTTTGTTTTGTTTGATGAAAAGTTATTACGATTGGCAATGA
TTCCAGGCTTATTTATGATGTTCGGGGGCATGATTTTTACGATTAGAGACGAGGTCAAGGCTTTAAGGCTAAATGATACC
TATAGACCCTTGATTTAG

Upstream 100 bases:

>100_bases
TAAAGTTGTTTTTTGATGCAGAACAAAGAAATGGTAAAAGTTGAAATAAAAGAATTGTTATTTACCATATCACAAACAAT
GAAGGTGAGGGGCGTGTTTT

Downstream 100 bases:

>100_bases
GAGACTTTTATGTATTATTTTATTCCAGCTTGGTATGGGTCAGAAAGAACATGGCATGCAGATATCACTCCATGGTATTT
TTCTCATTTTCGTCTAGAGT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTKIYSSITVKKGLFTLFLLFIYVLGSRITLPFVDLNSKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILW
QMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVVLMNTLLLIAGTIFLVWLSDLNASMGI
GGSIVILLSSIVLNIPQDVIETFKLVHIPTGIVLLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
AGGMPYMYVMSFLSVPAYLFTLLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSG
EYIYGIYPGADTSRFINRLVLRFSVIGGLFNVVMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNDT
YRPLI

Sequences:

>Translated_405_residues
MTKIYSSITVKKGLFTLFLLFIYVLGSRITLPFVDLNSKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILW
QMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVVLMNTLLLIAGTIFLVWLSDLNASMGI
GGSIVILLSSIVLNIPQDVIETFKLVHIPTGIVLLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
AGGMPYMYVMSFLSVPAYLFTLLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSG
EYIYGIYPGADTSRFINRLVLRFSVIGGLFNVVMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNDT
YRPLI
>Mature_404_residues
TKIYSSITVKKGLFTLFLLFIYVLGSRITLPFVDLNSKDFLGGSTAYLAFSAALTGGNLRSLSIFSVGLSPWMSAMILWQ
MFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSLSLPVQSSYSVILVVLMNTLLLIAGTIFLVWLSDLNASMGIG
GSIVILLSSIVLNIPQDVIETFKLVHIPTGIVLLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNPA
GGMPYMYVMSFLSVPAYLFTLLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSIIFAFVTMNGEEIADRMKKSGE
YIYGIYPGADTSRFINRLVLRFSVIGGLFNVVMAGGPMLFVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNDTY
RPLI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=362, Percent_Identity=24.585635359116, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 45356; Mature: 45225

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIYSSITVKKGLFTLFLLFIYVLGSRITLPFVDLNSKDFLGGSTAYLAFSAALTGGNL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHEEHHCCCCCC
RSLSIFSVGLSPWMSAMILWQMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSL
EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEE
SLPVQSSYSVILVVLMNTLLLIAGTIFLVWLSDLNASMGIGGSIVILLSSIVLNIPQDVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
ETFKLVHIPTGIVLLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHCEEEEEEEEC
AGGMPYMYVMSFLSVPAYLFTLLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFAFVTMNGEEIADRMKKSGEYIYGIYPGADTSRFINRLVLRFSVIGGLFNVVMAGGPML
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNDTYRPLI
EEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
TKIYSSITVKKGLFTLFLLFIYVLGSRITLPFVDLNSKDFLGGSTAYLAFSAALTGGNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHEEHHCCCCCC
RSLSIFSVGLSPWMSAMILWQMFSYSKKLGLSSTAIEIQDRRRMYLTLLIAVIQSLAVSL
EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEE
SLPVQSSYSVILVVLMNTLLLIAGTIFLVWLSDLNASMGIGGSIVILLSSIVLNIPQDVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
ETFKLVHIPTGIVLLLVFMTIIFSYLLALMYRARYLVPVNKIGLHNRFKRYSYLEIMLNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHCEEEEEEEEC
AGGMPYMYVMSFLSVPAYLFTLLGFIFPNHSGLAALSKEFMVGKPLWVYVYISVLFLFSI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFAFVTMNGEEIADRMKKSGEYIYGIYPGADTSRFINRLVLRFSVIGGLFNVVMAGGPML
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVLFDEKLLRLAMIPGLFMMFGGMIFTIRDEVKALRLNDTYRPLI
EEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]