Click here to switch to the map view.

The map label for this gene is epsJ [H]

Identifier: 221232107

GI number: 221232107

Start: 1302078

End: 1303064

Strand: Reverse

Name: epsJ [H]

Synonym: SPN23F_13310

Alternate gene names: 221232107

Gene position: 1303064-1302078 (Counterclockwise)

Preceding gene: 221232108

Following gene: 221232106

Centisome position: 58.66

GC content: 36.78

Gene sequence:

>987_bases
ATGGAAACTGCATTAATTAGTGTGATTGTGCCAGTCTATAATGTGGCGCAGTACCTAGAAAAATCGATAGCTTCCATTCA
GAAGCAGACCTATCAAAATCTGGAAATTATTCTTGTTGATGATGGTGCAACAGATGAAAGTGGTCGCTTGTGTGATTCAA
TCGCTGAACAAGATGACAGGGTGTCAGTGCTTCATAAAAAGAACGAAGGATTGTCGCAAGCACGAAATGATGGGATGAAG
CAGGCTCACGGGGATTATCTGATTTTTATTGACTCAGATGATTATATCCATCCAGAAATGATTCAGAGCTTATATGAGCA
ATTAGTTCAAGAAGATGCGGATGTTTCAAGCTGTGGTGTCATGAATGTCTATGCTAATGATGAAAGCCCACAGTCAGCCA
ATCAGGATGACTATTTTGTCTGTGATTCTCAAACATTTCTAAAGGAATACCTCATAGGTGAAAAAATACCTGGGACGATT
TGCAATAAGCTAATCAAGAGACAGATTGCAACTGCCCTATCCTTTCCTAAGGGGTTGATTTACGAAGATGCCTATTACCA
TTTTGATTTAATCAAGTTGGCCAAGAAGTATGTGGTTAATACTAAACCCTATTATTACTATTTCCATAGAGGGGATAGTA
TTACGACCAAACCCTATGCAGAGAAGGATTTAGCCTATATTGATATCTACCAAAAGTTTTATAATGAAGTTGTGAAAAAC
TATCCTGACTTGAAAGAGGTCGCTTTTTTCAGATTGGCCTATGCCCACTTCTTTATTCTGGATAAGATGTTGCTAGATGA
TCAGTATAAACAGTTTGAAGCCTATTCTCAGATTCATCGTTTTTTAAAAGGCCATGCCTTTGCTATTTCTAGGAATCCAA
TTTTCCGTAAGGGGAGAAGAATTAGTGCTTTGGCCCTATTCATAAATATTTCCTTATATCGATTCTTATTACTGAAAAAT
ATTGAAAAATCTAAAAAATTACATTAG

Upstream 100 bases:

>100_bases
TCTGCCTCAAACTTTGATGTCGATGAGGCTAGCCAATTCATTCAACAATTTACAATTACAAAACAAATCGAACAAGTAGA
AAAACTATTAGAGGAGTAGC

Downstream 100 bases:

>100_bases
AACGGGGGTGACCAAGTGATTGATGGGAAACGATTATTATTTAGTTTGACCATAGTCAGTTATGCCTTGACGCTAGTAAG
TGGAATTGTGTATCTGTTTA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
METALISVIVPVYNVAQYLEKSIASIQKQTYQNLEIILVDDGATDESGRLCDSIAEQDDRVSVLHKKNEGLSQARNDGMK
QAHGDYLIFIDSDDYIHPEMIQSLYEQLVQEDADVSSCGVMNVYANDESPQSANQDDYFVCDSQTFLKEYLIGEKIPGTI
CNKLIKRQIATALSFPKGLIYEDAYYHFDLIKLAKKYVVNTKPYYYYFHRGDSITTKPYAEKDLAYIDIYQKFYNEVVKN
YPDLKEVAFFRLAYAHFFILDKMLLDDQYKQFEAYSQIHRFLKGHAFAISRNPIFRKGRRISALALFINISLYRFLLLKN
IEKSKKLH

Sequences:

>Translated_328_residues
METALISVIVPVYNVAQYLEKSIASIQKQTYQNLEIILVDDGATDESGRLCDSIAEQDDRVSVLHKKNEGLSQARNDGMK
QAHGDYLIFIDSDDYIHPEMIQSLYEQLVQEDADVSSCGVMNVYANDESPQSANQDDYFVCDSQTFLKEYLIGEKIPGTI
CNKLIKRQIATALSFPKGLIYEDAYYHFDLIKLAKKYVVNTKPYYYYFHRGDSITTKPYAEKDLAYIDIYQKFYNEVVKN
YPDLKEVAFFRLAYAHFFILDKMLLDDQYKQFEAYSQIHRFLKGHAFAISRNPIFRKGRRISALALFINISLYRFLLLKN
IEKSKKLH
>Mature_328_residues
METALISVIVPVYNVAQYLEKSIASIQKQTYQNLEIILVDDGATDESGRLCDSIAEQDDRVSVLHKKNEGLSQARNDGMK
QAHGDYLIFIDSDDYIHPEMIQSLYEQLVQEDADVSSCGVMNVYANDESPQSANQDDYFVCDSQTFLKEYLIGEKIPGTI
CNKLIKRQIATALSFPKGLIYEDAYYHFDLIKLAKKYVVNTKPYYYYFHRGDSITTKPYAEKDLAYIDIYQKFYNEVVKN
YPDLKEVAFFRLAYAHFFILDKMLLDDQYKQFEAYSQIHRFLKGHAFAISRNPIFRKGRRISALALFINISLYRFLLLKN
IEKSKKLH

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=125, Percent_Identity=28, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1790044, Length=252, Percent_Identity=27.7777777777778, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787259, Length=89, Percent_Identity=35.9550561797753, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38099; Mature: 38099

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METALISVIVPVYNVAQYLEKSIASIQKQTYQNLEIILVDDGATDESGRLCDSIAEQDDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHCCCCH
VSVLHKKNEGLSQARNDGMKQAHGDYLIFIDSDDYIHPEMIQSLYEQLVQEDADVSSCGV
HHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
MNVYANDESPQSANQDDYFVCDSQTFLKEYLIGEKIPGTICNKLIKRQIATALSFPKGLI
EEEEECCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCE
YEDAYYHFDLIKLAKKYVVNTKPYYYYFHRGDSITTKPYAEKDLAYIDIYQKFYNEVVKN
ECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
YPDLKEVAFFRLAYAHFFILDKMLLDDQYKQFEAYSQIHRFLKGHAFAISRNPIFRKGRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCH
ISALALFINISLYRFLLLKNIEKSKKLH
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METALISVIVPVYNVAQYLEKSIASIQKQTYQNLEIILVDDGATDESGRLCDSIAEQDDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHCCCCH
VSVLHKKNEGLSQARNDGMKQAHGDYLIFIDSDDYIHPEMIQSLYEQLVQEDADVSSCGV
HHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
MNVYANDESPQSANQDDYFVCDSQTFLKEYLIGEKIPGTICNKLIKRQIATALSFPKGLI
EEEEECCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCE
YEDAYYHFDLIKLAKKYVVNTKPYYYYFHRGDSITTKPYAEKDLAYIDIYQKFYNEVVKN
ECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
YPDLKEVAFFRLAYAHFFILDKMLLDDQYKQFEAYSQIHRFLKGHAFAISRNPIFRKGRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCH
ISALALFINISLYRFLLLKNIEKSKKLH
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]