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The map label for this gene is orf9

Identifier: 221232085

GI number: 221232085

Start: 1280867

End: 1281220

Strand: Reverse

Name: orf9

Synonym: SPN23F_13060

Alternate gene names: NA

Gene position: 1281220-1280867 (Counterclockwise)

Preceding gene: 221232089

Following gene: 221232072

Centisome position: 57.68

GC content: 36.44

Gene sequence:

>354_bases
ATGCGTAAAAAAGAAGATAAATATGATTTTAGAGCCTTTGGTTTAGCCATTAAAGAAGCTCGATTGAAACGAGGTTTAAC
TCGTGAACAAGTGGGAGCATTGATTGAAATTGACCCACGGTACTTAACTAATATTGAAAATAAAGGGCAACACCCCAGCA
TACAAGTTCTTTATGACCTTGTATCGTTACTTCATGTTTCCGTTGATGAATTTTTCTTACCTGCTAATAACTTGGTAAAA
AGCACCCGACGATTACAGATAGAGAAATACATGGATAGCTTTACAGACAAAGAACTATCCTTAATGGAATCTTTAGCCAG
CGGTATCAACGAAGCAAGAAACATCGAAGACTAA

Upstream 100 bases:

>100_bases
GTGCTTTTTATTAAATATAAACCTATAAACCATATAACACGTTTTTCTATACCTGTTTTTAATTCAGTAGGAACAATAAA
ATGTATAGAGGTGGTCTACT

Downstream 100 bases:

>100_bases
TTAAAAGAATCCATACATAACGGAAAGAGCCGATAAAATGAGATTGTATTAATCTCATTTTATCGGCTCTGCGTCTTTGC
GTCTGGCTCTGTAATCACAG

Product: conjugative transposon regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVK
STRRLQIEKYMDSFTDKELSLMESLASGINEARNIED

Sequences:

>Translated_117_residues
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVK
STRRLQIEKYMDSFTDKELSLMESLASGINEARNIED
>Mature_117_residues
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVK
STRRLQIEKYMDSFTDKELSLMESLASGINEARNIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13545; Mature: 13545

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDL
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHCCCCCCCCCHHHHHHHH
VSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDL
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHCCCCCCCCCHHHHHHHH
VSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA