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The map label for this gene is int [H]

Identifier: 221232023

GI number: 221232023

Start: 1207785

End: 1208972

Strand: Reverse

Name: int [H]

Synonym: SPN23F_12410

Alternate gene names: 221232023

Gene position: 1208972-1207785 (Counterclockwise)

Preceding gene: 221232024

Following gene: 221232022

Centisome position: 54.43

GC content: 30.64

Gene sequence:

>1188_bases
ATGGTTATATCAAAGACAAAGAAATATAAAGGTGTATACAAAGATTCAAAAGGAAAAATTTATTTTCAAATTGAATTAGG
AGTTGATCCAATAACTGGGAAAAGAATTCAAAAGAAAGGAAGGAAAAATCAACAGGGACTACCGTTTAATTCTTTTAAGG
AAGCATATGAAGAGATACTTCGTTTAAAACATGAATTTGTGAACTCTACTATTAATAATAGTTTTTTAACTTTTAGAGAG
TTTATGGAAGAGATTTATTTAAAATATTATCAACAAAAAGTTCAATTTGTAACTTATCAGACCGCTTTACCACATCATCA
GTTATTTATTAAGCAATTTGGTAGTAAAAAATTATCAGATATTAGTACTATTGACTGTGAAAGATTTCGCTTAGCTATTA
TAGACAAGTATTCTAGTAACTACGCTAAAAATATGTGGTCTAGATTTAAAGCATGTCTGGGCTATGCAGAAAGATTGGGT
TATATTGATAGAGTTCCTTTTAAAGGATTAGATAATCCTAGAGGAAAGCACCCTGATACAAAATTTTGGACATTTGATGA
ATTTAAGAAGATAATAAACTCTTTTGATATTAGTGAGTATGAGGGACTCCATAATTACATGACGATCTGGTTATATTTTA
TGACTGGCTTAAGAGTTAGTGAGGGTATTGCACTTAAATGGGAAGATATTGATTTTGAACGTAAATGGATTCATGTTCAT
TCGACAATTGAGAAAGACAAAAACGGTGTATGGTATGCTAAACAACAAACAAAGACAGTAGCAGGGAATCGTAAAATTGA
TTTAGATGATTTTACGATTACAATACTTAAAAAATGGCGAGAAGTTCAAATCAAGAATGATGATAAAGATTATGTAATAT
CACGTTTTGGTGCCCCTTTGTGTAAGTCTACAATTTCTAGGATAATAAAGAGGCATGCTAAGATTACTGGTGTACCAGAA
ATTACGGGGAAAGGATTAAGACATAGTCATGCATCTTATCTTATAAATGTGTTACATAAGGATACTTTATATGTTTCATA
TCGATTAGGACACGCTGATAAGTCAACCACGTTGAATACATATAGTCATTGGTATTATTCAGGTGATTCAACAATTTCAG
AAGAGATTACAAACAGTTTAGATAATCTTGGATTATCAATTTACCTACCAAATTCCTGCCAGAGTTGA

Upstream 100 bases:

>100_bases
GGATGTTCACCTTTCGATAATAAAAGGTTAGGCATTGCTCCTAAAAATATTGTAGAAAATTTAATTGGTATTTCTTTTTC
AGATATAGAAGGTGAGAAAA

Downstream 100 bases:

>100_bases
AAATTGAGGAATTAACCCACTAATACTGGGAGAAAATAGGATTTGCAAATTGTTACTCTTAAATAATAGAGTATCGCAAT
TTGATTGCGGAATCCCTATT

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVISKTKKYKGVYKDSKGKIYFQIELGVDPITGKRIQKKGRKNQQGLPFNSFKEAYEEILRLKHEFVNSTINNSFLTFRE
FMEEIYLKYYQQKVQFVTYQTALPHHQLFIKQFGSKKLSDISTIDCERFRLAIIDKYSSNYAKNMWSRFKACLGYAERLG
YIDRVPFKGLDNPRGKHPDTKFWTFDEFKKIINSFDISEYEGLHNYMTIWLYFMTGLRVSEGIALKWEDIDFERKWIHVH
STIEKDKNGVWYAKQQTKTVAGNRKIDLDDFTITILKKWREVQIKNDDKDYVISRFGAPLCKSTISRIIKRHAKITGVPE
ITGKGLRHSHASYLINVLHKDTLYVSYRLGHADKSTTLNTYSHWYYSGDSTISEEITNSLDNLGLSIYLPNSCQS

Sequences:

>Translated_395_residues
MVISKTKKYKGVYKDSKGKIYFQIELGVDPITGKRIQKKGRKNQQGLPFNSFKEAYEEILRLKHEFVNSTINNSFLTFRE
FMEEIYLKYYQQKVQFVTYQTALPHHQLFIKQFGSKKLSDISTIDCERFRLAIIDKYSSNYAKNMWSRFKACLGYAERLG
YIDRVPFKGLDNPRGKHPDTKFWTFDEFKKIINSFDISEYEGLHNYMTIWLYFMTGLRVSEGIALKWEDIDFERKWIHVH
STIEKDKNGVWYAKQQTKTVAGNRKIDLDDFTITILKKWREVQIKNDDKDYVISRFGAPLCKSTISRIIKRHAKITGVPE
ITGKGLRHSHASYLINVLHKDTLYVSYRLGHADKSTTLNTYSHWYYSGDSTISEEITNSLDNLGLSIYLPNSCQS
>Mature_395_residues
MVISKTKKYKGVYKDSKGKIYFQIELGVDPITGKRIQKKGRKNQQGLPFNSFKEAYEEILRLKHEFVNSTINNSFLTFRE
FMEEIYLKYYQQKVQFVTYQTALPHHQLFIKQFGSKKLSDISTIDCERFRLAIIDKYSSNYAKNMWSRFKACLGYAERLG
YIDRVPFKGLDNPRGKHPDTKFWTFDEFKKIINSFDISEYEGLHNYMTIWLYFMTGLRVSEGIALKWEDIDFERKWIHVH
STIEKDKNGVWYAKQQTKTVAGNRKIDLDDFTITILKKWREVQIKNDDKDYVISRFGAPLCKSTISRIIKRHAKITGVPE
ITGKGLRHSHASYLINVLHKDTLYVSYRLGHADKSTTLNTYSHWYYSGDSTISEEITNSLDNLGLSIYLPNSCQS

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46357; Mature: 46357

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISKTKKYKGVYKDSKGKIYFQIELGVDPITGKRIQKKGRKNQQGLPFNSFKEAYEEIL
CCCCCCCHHCCCEECCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
RLKHEFVNSTINNSFLTFREFMEEIYLKYYQQKVQFVTYQTALPHHQLFIKQFGSKKLSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHCCCHHCC
ISTIDCERFRLAIIDKYSSNYAKNMWSRFKACLGYAERLGYIDRVPFKGLDNPRGKHPDT
CCCCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
KFWTFDEFKKIINSFDISEYEGLHNYMTIWLYFMTGLRVSEGIALKWEDIDFERKWIHVH
CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEEEE
STIEKDKNGVWYAKQQTKTVAGNRKIDLDDFTITILKKWREVQIKNDDKDYVISRFGAPL
HHHHHCCCCEEEECCCCHHHCCCCEECCCHHHHHHHHHHHHEEECCCCHHHHHHHHCCHH
CKSTISRIIKRHAKITGVPEITGKGLRHSHASYLINVLHKDTLYVSYRLGHADKSTTLNT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEC
YSHWYYSGDSTISEEITNSLDNLGLSIYLPNSCQS
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MVISKTKKYKGVYKDSKGKIYFQIELGVDPITGKRIQKKGRKNQQGLPFNSFKEAYEEIL
CCCCCCCHHCCCEECCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
RLKHEFVNSTINNSFLTFREFMEEIYLKYYQQKVQFVTYQTALPHHQLFIKQFGSKKLSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHCCCHHCC
ISTIDCERFRLAIIDKYSSNYAKNMWSRFKACLGYAERLGYIDRVPFKGLDNPRGKHPDT
CCCCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
KFWTFDEFKKIINSFDISEYEGLHNYMTIWLYFMTGLRVSEGIALKWEDIDFERKWIHVH
CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEEEE
STIEKDKNGVWYAKQQTKTVAGNRKIDLDDFTITILKKWREVQIKNDDKDYVISRFGAPL
HHHHHCCCCEEEECCCCHHHCCCCEECCCHHHHHHHHHHHHEEECCCCHHHHHHHHCCHH
CKSTISRIIKRHAKITGVPEITGKGLRHSHASYLINVLHKDTLYVSYRLGHADKSTTLNT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEC
YSHWYYSGDSTISEEITNSLDNLGLSIYLPNSCQS
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]