Click here to switch to the map view.

The map label for this gene is rgg [H]

Identifier: 221231804

GI number: 221231804

Start: 944159

End: 945010

Strand: Reverse

Name: rgg [H]

Synonym: SPN23F_09790

Alternate gene names: 221231804

Gene position: 945010-944159 (Counterclockwise)

Preceding gene: 221231831

Following gene: 221231771

Centisome position: 42.54

GC content: 30.28

Gene sequence:

>852_bases
ATGAAATCAAAACTTGGCATCACACTTAGAAAAGTTCGTAAAGGAAAACAAATTAGTCTATGCTCTGTAGCAGATGAACA
TCTTTCAAAATCACAAATATCTCGTTTTGAACGTGGGGAGTCAGAGATATCTTGTATTCGACTAATCAATATTTTAGACA
AATTACATATTACTTTGGATGAGTTCCTTGTTTTACACAATGACGACTATACCAGTTCCGAATCATTTGCTAATCTAGTA
CAGTACATTCGTAAGCAATATTCATCACAAAGTATCAATAATATAGCATGTCTACTTTCTGATACTTCTGATTACACTCT
AAATTCTTTTGAGAAAACAATGGTAAAATCTATTTTACACACAATGGATTCGAACATCATTCCATCAGATGAAGAGCTTC
TTCATCTGACAGACTATCTTTTCAAAATTGAAAAATGGGGCTATTATGAAATCATTTTATTAGGTAACTGTGTACGCACA
ATTAACTACAACTCCTACTTCTTATTAACTAAAGAGATGTTAAATAACTATATTTACTCATCTCTGAATAAAACTAATAA
GCAGATTGTCTCTCAGCTTGCTATTAATTGCTTCATTCTAAGCATTGATAAGGAAGAATTTTCTAATTGCTCCTATTTAA
TTAGTAAGATAAAGACATTGTTGGATAATGAACTAAACTTTTATGAACAGACAGTTTTTCTCTATGCAACCGGTTACTAT
GAATTTAAACGTCAATTAAGTAGTGGTATTGAAACAATGAAACAAGCTATACAAGTTCTCGATATTTTAGGAGAAGACAA
GTTAAAATTACACTATACTAGCCATTTTGATAAACTTGTAAACAATAAATGA

Upstream 100 bases:

>100_bases
AAATTTTGAAATTTTCTTCATACTTGGACTTCCTTTCCGTTTTTATTTATTGTACAATAAATAAAAACGGATTTAATTTT
TGTTGGGAAAATGGGAAATT

Downstream 100 bases:

>100_bases
AATGATTCTCTATCTTTTAACTAATTAGTCGTAAATAATATTATTCTAGTAAGGCATTCTCGTGAAATTTTAGAACTGTA
AATTTATTGGTATTAATAAT

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKSKLGITLRKVRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLVLHNDDYTSSESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYY
EFKRQLSSGIETMKQAIQVLDILGEDKLKLHYTSHFDKLVNNK

Sequences:

>Translated_283_residues
MKSKLGITLRKVRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLVLHNDDYTSSESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYY
EFKRQLSSGIETMKQAIQVLDILGEDKLKLHYTSHFDKLVNNK
>Mature_283_residues
MKSKLGITLRKVRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLVLHNDDYTSSESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYY
EFKRQLSSGIETMKQAIQVLDILGEDKLKLHYTSHFDKLVNNK

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 32933; Mature: 32933

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLGITLRKVRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLVLHNDDYTSSESFANLVQYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEECCCCEEEEHHHHHHHHHHH
SLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYY
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCHH
EFKRQLSSGIETMKQAIQVLDILGEDKLKLHYTSHFDKLVNNK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MKSKLGITLRKVRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLVLHNDDYTSSESFANLVQYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEECCCCEEEEHHHHHHHHHHH
SLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYY
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCHH
EFKRQLSSGIETMKQAIQVLDILGEDKLKLHYTSHFDKLVNNK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]