| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is 221231747
Identifier: 221231747
GI number: 221231747
Start: 883154
End: 883954
Strand: Reverse
Name: 221231747
Synonym: SPN23F_09120
Alternate gene names: NA
Gene position: 883954-883154 (Counterclockwise)
Preceding gene: 221231763
Following gene: 221231746
Centisome position: 39.79
GC content: 38.2
Gene sequence:
>801_bases ATGAGAAAACAAATTCATCCACTTATTTTATTTAGTTTTTTTGGGATTATGATGTTCATTTTAATCATCAATCGCCCACT TAATGACAGCCAATCGTTTAAAACAAAATCCAATATAGCACAGATTGAAGCACAGGCTTTGAAACACTTAGACAAACCGA TTATTGACCTCTCTGGCTGGCAGCGTCCTGAGGAAATCAACTACGATGCCCTCTCACAAAATATTTCAGGTGCTATTGTT CGTGTTCACAGTGGTGCTCAAACAACAAAAGAAAATGATGCTTCATTTATCAATGGAATAGACAAGACCTATAAGAGTCA TATCACTGAACTTCAAAAGCGGAATGTCCCAGTTGCTGTCTACGCTTATGTAGCTGGAAAAAGTGTCCAAGAAATGGAAA AGGCTGCCGAAGTTTTCTACAATGCTGCCTCTCCTTACAGCCCTAGTTACTATTGGCTTGACGTGGAAGACAAAACCATG TCTAATATGAACGAAGGTGTCGAAAACTTTCGAGCAAAACTAGCATCACTAGGTGCTAAAAACATCGGCATCTACGTTGG TGTCTACTTCATGGAAGAACACAGTATTGATACAGGCAAGTTTACCTCTGTTTGGATTCCGTCCTACGGCTCAGACTCAG GATTTTTGGAGAGCAGTCCTAAAACTGATTTAGATTATGATATTCACCAATACACATCTAAAGGAAAAATTGCCGGCTTT GACCACGATTTAGATATCAACGTTATCTCTCCCTTAAAAAATAAAGAAGAAACCTTTCGAAAACTTTTTTTAAAACCTTA A
Upstream 100 bases:
>100_bases TTCAAATCATTCCGCACTCTTGAATGAAAAAATGCTCTAAAGTCTCTTCCTTAACCCATTTTTTTGATTTTTTTTGATTT TTAGGGTAGAATTATAAGAT
Downstream 100 bases:
>100_bases AAGCATTTGTTTATCATTTGCTTTTTCTTTTTGTGTCTGATTGTGATACAATATAGTAAGGATTTTTTGAAATAGAAATA GTTGGAGGAAATATATGCTC
Product: glycosyl hydrolase
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; N-Acetylmuramoyl-L-Alanine Amidase; Glycosyl Hydrolases Family Protein; Phage Lysin; Glycosyl Hydrolase Family; Prophage; U32 Family Peptidase; Glycoside Hydrolase Family; Peptidase; Glycosyl Hydrolases Family; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV RVHSGAQTTKENDASFINGIDKTYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF DHDLDINVISPLKNKEETFRKLFLKP
Sequences:
>Translated_266_residues MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV RVHSGAQTTKENDASFINGIDKTYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF DHDLDINVISPLKNKEETFRKLFLKP >Mature_266_residues MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV RVHSGAQTTKENDASFINGIDKTYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF DHDLDINVISPLKNKEETFRKLFLKP
Specific function: Unknown
COG id: COG3757
COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30083; Mature: 30083
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCC QRPEEINYDALSQNISGAIVRVHSGAQTTKENDASFINGIDKTYKSHITELQKRNVPVAV CCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK EEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECC DHDLDINVISPLKNKEETFRKLFLKP CCCCCEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCC QRPEEINYDALSQNISGAIVRVHSGAQTTKENDASFINGIDKTYKSHITELQKRNVPVAV CCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK EEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECC DHDLDINVISPLKNKEETFRKLFLKP CCCCCEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA