| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is fbpS [H]
Identifier: 221231729
GI number: 221231729
Start: 864927
End: 866582
Strand: Reverse
Name: fbpS [H]
Synonym: SPN23F_08910
Alternate gene names: 221231729
Gene position: 866582-864927 (Counterclockwise)
Preceding gene: 221231744
Following gene: 221231696
Centisome position: 39.01
GC content: 42.27
Gene sequence:
>1656_bases ATGTCATTTGATGGATTTTTTTTACACCACATAGTTGAGGAATTGCGAAGCGAATTAGTGAATGGTCGCATCCAGAAAAT CAATCAGCCTTTTGAACAAGAGTTGGTCTTGCAAATCCGCAGCAATCGCCAAAGCCATCGCCTGCTCCTTTCTGCCCATC CAGTTTTTGGACGCATTCAGCTGACCCAAACGACTTTTGAAAATCCAGCTCAACCTTCTACCTTTATCATGGTTTTGAGA AAGTATTTGCAGGGGGCCCTGATTGAGTCGATTGAGCAAGTGGAAAATGACCGTATTGTGGAAATTACAGTTTCCAATAA AAACGAGATTGGAGACCATATCCAGGCTACCTTGATTATTGAAATTATGGGGAAACACAGTAATATTCTACTGGTCGATA AAAGCAGTCATAAAATCCTCGAAGTTATCAAACACGTCGGTTTTTCACAAAATAGCTACCGCACCTTACTTCCAGGATTG ACCTATATCGCTCCGCCAAGTACAGAATCTCTCAATCCTTTTACTATCAAAGATGAAAAGCTCTTTGAAATCCTGCAAAC CCAAGAACTAACAGCAAAAAATCTTCAAAGCCTCTTTCAAGGTCTGGGACGCGATACTGCAAATGAATTGGAAAGGATAC TGGTTAGTGAAAAACTTTCCGCTTTCCGAAATTTTTTCAATCAAGAAACCAAGCCATGCTTGACTGAGACTTCCTTCAGT CCAGTTCCTTTTGCAAATCAGGTGGGAGAGCCTTTTGCAAATCTTTCTGATTTGTTGGACACCTACTATAAGGATAAGGC TGAGCGCGACCGCGTCAAACAGCAGGCCAGTGAACTGATTCGTCGTGTTGAAAATGAACTTCAGAAAAACCGACACAAAC TCAAAAAACAGGAAAAAGAGTTACTGGCGACAGACAACGCTGAAGAATTTCGTCAAAAAGGAGAATTGCTGACAACCTTC CTACACCAAGTGCCTAACGACCAAGACCAGGTTATCCTAGACAACTACTATACCAACCAACCTATCATGATTGCGCTTGA TAAGGCTCTGACTCCCAACCAGAATGCCCAACGCTATTTTAAACGGTATCAGAAACTCAAAGAAGCTGTCAAATACTTGA CTGATTTGATTGAAGAAACCAAAGCCACTATTCTCTATCTGGAAAGTGTAGAAACCGTCCTCAACCAAGCTGGACTGGAA GAAATCGCTGAAATCCGTGAAGAATTGATTCAAACAGGTTTTATCCGCAGAAGACAACGGGAGAAAATCCAGAAACGCAA AAAACTAGAACAATATCTAGCAAGCGATGGCAAAACCATCATCTATGTCGGACGAAACAATCTTCAAAATGAGGAATTGA CCTTTAAAATGGCCCGCAAGGAGGAACTTTGGTTCCATGCTAAGGACATTCCTGGAAGCCATGTTGTCATCTCAGGAAAT CTTGACCCATCTGATGCAGTCAAGACAGACGCAGCAGAGTTAGCTGCCTACTTCTCTCAAGGGCGCCTGTCGAATCTGGT GCAGGTAGATATGATTGAAGTCAAAAAACTCAATAAACCAACTGGTGGAAAACCCGGCTTTGTCACTTACACAGGACAAA AGACCCTCCGCGTCACACCAGACTCCAAAAAAATTGCATCCATGAAAAAATCCTGA
Upstream 100 bases:
>100_bases TTCTCGTTTCTCTTTACTTGGCTTTATTATACCACATTTCTATGATTTTATTCTACCTTTTTGATATAATACTATGGAAT ACAATCACAAGGAGAGAACG
Downstream 100 bases:
>100_bases TTTTACTTGAAATCAGGATTTTTAACTTACTATTCACTCAAATCATATTCACTTATAGTACTAATCTTTGCCACCTAGCT TCTCATTGATTTTCATCATC
Product: fibronectin/fibrinogen-binding protein adherence and virulence protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQLTQTTFENPAQPSTFIMVLR KYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLIIEIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGL TYIAPPSTESLNPFTIKDEKLFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKELLATDNAEEFRQKGELLTTF LHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYFKRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLE EIAEIREELIQTGFIRRRQREKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTPDSKKIASMKKS
Sequences:
>Translated_551_residues MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQLTQTTFENPAQPSTFIMVLR KYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLIIEIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGL TYIAPPSTESLNPFTIKDEKLFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKELLATDNAEEFRQKGELLTTF LHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYFKRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLE EIAEIREELIQTGFIRRRQREKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTPDSKKIASMKKS >Mature_550_residues SFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQLTQTTFENPAQPSTFIMVLRK YLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLIIEIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGLT YIAPPSTESLNPFTIKDEKLFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFSP VPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKELLATDNAEEFRQKGELLTTFL HQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYFKRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEE IAEIREELIQTGFIRRRQREKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGNL DPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTPDSKKIASMKKS
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SDCCAG1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 63318; Mature: 63187
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ CCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHEEEEEECCCEEEEE LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLII EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHE EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGLTYIAPPSTESLNPFTIKDEK EEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCEECCCCCCCCCCCEECHHH LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE CCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCEEEEECCCCCCCCHHHHHH KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCEEEEECC LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECC DSKKIASMKKS CHHHHHHCCCC >Mature Secondary Structure SFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ CCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHEEEEEECCCEEEEE LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLII EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHE EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGLTYIAPPSTESLNPFTIKDEK EEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCEECCCCCCCCCCCEECHHH LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE CCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCEEEEECCCCCCCCHHHHHH KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCEEEEECC LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECC DSKKIASMKKS CHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9534248 [H]