| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is muT4 [H]
Identifier: 221230935
GI number: 221230935
Start: 3249783
End: 3250538
Strand: Direct
Name: muT4 [H]
Synonym: MLBr_02698
Alternate gene names: 221230935
Gene position: 3249783-3250538 (Clockwise)
Preceding gene: 221230933
Following gene: 221230936
Centisome position: 99.44
GC content: 60.98
Gene sequence:
>756_bases GTGCCAGCTATTATCGCTTGGGTGTCGGATGGCGAACAAGCCAAACCACGTCGGCGCCGAAAGCGACGGCGCGGTCGTGA CGCCACGCGTTCAGCTGAGAACCACACAGACCGACAAGTGGCCAACGACGCAACCGCGACAAAACCGCGCCGCAGCCATT CACCACATCGCGCACCCGAACAGCTGCGCACGGTGCACGAAACGTCCGCAGGAGGTCTAGTCATCTACGGTATCGACGGC CCACGTGACGCCCAGGTTGCCGCTCTGATTGGTCGTATCGATCGACGAGGACGAATGCTTTGGTCGCTGCCCAAAGGGCA TATCGAGCAAGGGGAGACCGCGGAGCAGACCGCTATCCGTGAGGTCGCCGAAGAGACAGGAATCCGCGGTAGCGTGCTCG CCGCGCTGGGGCAAATCGACTACTGGTTCGTCACCGACGACTGTCGGGTGCATAAGACAGTACACCACTATTTGATGCGC TTTTCTGGTGGTGAATTGTCCGACGACGACCTCGAGGTGACCGAAGTTGCTTGGGTGCCGATACGAGAACTGCCGTCCCG CCTGGCCTACGCTGACGAACGCCGCCTGGCCGAGGTTGCCTACGAACTGATCAACAAGCTGCAAACCGGTGGTCCAGCCG CGCTTCCACCGCTGCCACCCAGCTTGCCTCGGCGACAGTCGCAAACGCATTTCCGCACGCGTCATTCCAACAATTCCGCA AACAGTCGGAAGAATGGTCACGGACAGGGGCCGTGA
Upstream 100 bases:
>100_bases GTGCAACGGTGATCCAATCGATCCACTAAGTGACCCAGCCATGAACCTACTGTAACGCTGCGTACCTGACTAGCGGCGCG CATGTCCTGAAGACCGGCTC
Downstream 100 bases:
>100_bases CTGCATCGAGACTCCGGTTGGCCGGCTCGCTGAGCATTGCCTTAGTGGTCGACATCGTGGCTAGTTTTGCGGTGCTGCTC GTCGCACCTACCGCCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPAIIAWVSDGEQAKPRRRRKRRRGRDATRSAENHTDRQVANDATATKPRRSHSPHRAPEQLRTVHETSAGGLVIYGIDG PRDAQVAALIGRIDRRGRMLWSLPKGHIEQGETAEQTAIREVAEETGIRGSVLAALGQIDYWFVTDDCRVHKTVHHYLMR FSGGELSDDDLEVTEVAWVPIRELPSRLAYADERRLAEVAYELINKLQTGGPAALPPLPPSLPRRQSQTHFRTRHSNNSA NSRKNGHGQGP
Sequences:
>Translated_251_residues MPAIIAWVSDGEQAKPRRRRKRRRGRDATRSAENHTDRQVANDATATKPRRSHSPHRAPEQLRTVHETSAGGLVIYGIDG PRDAQVAALIGRIDRRGRMLWSLPKGHIEQGETAEQTAIREVAEETGIRGSVLAALGQIDYWFVTDDCRVHKTVHHYLMR FSGGELSDDDLEVTEVAWVPIRELPSRLAYADERRLAEVAYELINKLQTGGPAALPPLPPSLPRRQSQTHFRTRHSNNSA NSRKNGHGQGP >Mature_250_residues PAIIAWVSDGEQAKPRRRRKRRRGRDATRSAENHTDRQVANDATATKPRRSHSPHRAPEQLRTVHETSAGGLVIYGIDGP RDAQVAALIGRIDRRGRMLWSLPKGHIEQGETAEQTAIREVAEETGIRGSVLAALGQIDYWFVTDDCRVHKTVHHYLMRF SGGELSDDDLEVTEVAWVPIRELPSRLAYADERRLAEVAYELINKLQTGGPAALPPLPPSLPRRQSQTHFRTRHSNNSAN SRKNGHGQGP
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 28084; Mature: 27953
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIIAWVSDGEQAKPRRRRKRRRGRDATRSAENHTDRQVANDATATKPRRSHSPHRAPE CCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHH QLRTVHETSAGGLVIYGIDGPRDAQVAALIGRIDRRGRMLWSLPKGHIEQGETAEQTAIR HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH EVAEETGIRGSVLAALGQIDYWFVTDDCRVHKTVHHYLMRFSGGELSDDDLEVTEVAWVP HHHHHHCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECC IRELPSRLAYADERRLAEVAYELINKLQTGGPAALPPLPPSLPRRQSQTHFRTRHSNNSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC NSRKNGHGQGP CCCCCCCCCCC >Mature Secondary Structure PAIIAWVSDGEQAKPRRRRKRRRGRDATRSAENHTDRQVANDATATKPRRSHSPHRAPE CEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHH QLRTVHETSAGGLVIYGIDGPRDAQVAALIGRIDRRGRMLWSLPKGHIEQGETAEQTAIR HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH EVAEETGIRGSVLAALGQIDYWFVTDDCRVHKTVHHYLMRFSGGELSDDDLEVTEVAWVP HHHHHHCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECC IRELPSRLAYADERRLAEVAYELINKLQTGGPAALPPLPPSLPRRQSQTHFRTRHSNNSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC NSRKNGHGQGP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]