| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is mce1F
Identifier: 221230875
GI number: 221230875
Start: 3098993
End: 3100543
Strand: Direct
Name: mce1F
Synonym: MLBr_02594
Alternate gene names: NA
Gene position: 3098993-3100543 (Clockwise)
Preceding gene: 221230874
Following gene: 221230876
Centisome position: 94.83
GC content: 59.12
Gene sequence:
>1551_bases ATGCTGACTCCCCTCATCAGACGGCAACTGGTCCTGTTCGCCATCCTGACCGTCATTTCGTTGACTGTCCTGGGCGTGTA TTACTTGCAGATTCCAAGTTTGGTGGGTATCGGTCGGTATTCGCTGAAGGCGGAGTTGTCCGCAACAGGCGGGCTGTATC CGACGGCCAACGTGACCTACCGCGGCATAGCTATCGGCAAAGTCACCGATGTCGAGCCGACCGCAACGGGTGCCGAAGCG ACAATGAGTATCGACAGTCGCTATAAGATCCCGATTGATTCGGCAGCGAATGTGCACTCGGTTTCGGCGGTTGGTGAACA GTACCTGGACCTGGTGTCGAGCGGGAACCCCGGCAAGTACTTGGCACCCGGACAAACCATCACCAAGAGCAAAATACCCA TTGAGATCGGGCCGGCACTGGACTCCGTTAACCGAGGGCTTGCCGCGTTGCCGAAGGAAAAGATCGGCTCGCTACTCGAC GAGACAGCGCAAGCAGTCGGTGGGTTGGGTCCGGCTCTGCAACGGTTAGTTAGTTCCACTCAGGCGATTGTTGACGCTTT TAAGACCAACATCACCGACGTCAACGACATCATCCAAAACTCTGGGCCGATCCTGGATAGCCAAGTCAAATCCGACAATG CGATTGAGCGTTGGGTGCACAACCTGAATGTCCTGGCAGCGCAGTCCGCACGACAAGATCAGCATTTGAAAAGTATTCTG TCCCAAGCGGCGCCGACCGCCGATGAGGTCAACACGGTATTTAGTGACGTACGAGATTCACTTCCACAGACGCTGGCGAA CTTCGAAATCCTGATCGACATGCTCAAGCGCTACCACCATGGTGTGGAGCAAATGCTGGTGTTTCTGCCGCAGGGGGCTT CAATTGCGCAGACGGCGTCAGCGACGTTCCCGAATATGGCCGCGCTTGATCTGGCGTTGTCGATCAACCAGCCGCCGCCT TGTCTAACTGGCTTCATTCCAGCAGCGGAGTGGCGCTCGCCGGCGGACACCAGCCTGCAGCCGTTGCCGGTCGGTACGTA CTGCAAGATCCCGATGGACACGCCGGCTAACAGCGTGCGCGGATCGCGAAACATTCCGTGCGTCGATGTCCCCGGCAAGC GGGCTGCCTCGCCACGGGAATGCCGCGACTCTAAACCGTATGTTCCGCTAGGGACCAATCCCTGGTTCGGCGACCCGAAC CAGCTCCTAACCTGTCCGGCGCCCGGCGCCCGCTGCGATCAGCCGGTCAAGCCAGGCTTGGTGATTCCGGCGCCGACGGT TGACAACGGCCTGAACCCGGCGCCCGCTGACCGGCTGCCGGGGACACCACCGCCGGTTAGCGACCCTTTGTCGCAGCCAC GATCCGGTAGCGTACAGTGCAACGGACAGCAACCCAACACGTGTGTCTACACTCCGAGTGGGCCTCCTTCGGCTGTGTAC AGTCCCCAAAGCGGTGAACTGGTAGGGCCCGACGGAGTGGCATATGCTGTCGAAAACTCGACTAAAACAGGAGATGACGG ATGGAAGGAGATGCTGGCACCAGCTGGCTGA
Upstream 100 bases:
>100_bases CCTTTGGTCGCGATCCTGAAACGATGATCCCCGACGTTCGCTACACGACGAACCCCAATGACGCACCCGGCGGACCGTTG GTGGAAAGGGCCGATAGGCG
Downstream 100 bases:
>100_bases ACCTCCACCGATGTTGATGCTTCGTCGTTTGCAAATACTTTCCCGGAGATCCGGGCAGAAAATTCGACAGGACTCCCAGC TCGGGGCCGGCCAAGCCGGC
Product: putative secreted protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; MCE-Family; Virulence Factor; Mce Family D; Mce Related Protein; Mce Family; Mce-Related Protein
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLTPLIRRQLVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSATGGLYPTANVTYRGIAIGKVTDVEPTATGAEA TMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKYLAPGQTITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLD ETAQAVGGLGPALQRLVSSTQAIVDAFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSIL SQAAPTADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTASATFPNMAALDLALSINQPPP CLTGFIPAAEWRSPADTSLQPLPVGTYCKIPMDTPANSVRGSRNIPCVDVPGKRAASPRECRDSKPYVPLGTNPWFGDPN QLLTCPAPGARCDQPVKPGLVIPAPTVDNGLNPAPADRLPGTPPPVSDPLSQPRSGSVQCNGQQPNTCVYTPSGPPSAVY SPQSGELVGPDGVAYAVENSTKTGDDGWKEMLAPAG
Sequences:
>Translated_516_residues MLTPLIRRQLVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSATGGLYPTANVTYRGIAIGKVTDVEPTATGAEA TMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKYLAPGQTITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLD ETAQAVGGLGPALQRLVSSTQAIVDAFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSIL SQAAPTADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTASATFPNMAALDLALSINQPPP CLTGFIPAAEWRSPADTSLQPLPVGTYCKIPMDTPANSVRGSRNIPCVDVPGKRAASPRECRDSKPYVPLGTNPWFGDPN QLLTCPAPGARCDQPVKPGLVIPAPTVDNGLNPAPADRLPGTPPPVSDPLSQPRSGSVQCNGQQPNTCVYTPSGPPSAVY SPQSGELVGPDGVAYAVENSTKTGDDGWKEMLAPAG >Mature_516_residues MLTPLIRRQLVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSATGGLYPTANVTYRGIAIGKVTDVEPTATGAEA TMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKYLAPGQTITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLD ETAQAVGGLGPALQRLVSSTQAIVDAFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSIL SQAAPTADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTASATFPNMAALDLALSINQPPP CLTGFIPAAEWRSPADTSLQPLPVGTYCKIPMDTPANSVRGSRNIPCVDVPGKRAASPRECRDSKPYVPLGTNPWFGDPN QLLTCPAPGARCDQPVKPGLVIPAPTVDNGLNPAPADRLPGTPPPVSDPLSQPRSGSVQCNGQQPNTCVYTPSGPPSAVY SPQSGELVGPDGVAYAVENSTKTGDDGWKEMLAPAG
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54397; Mature: 54397
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPLIRRQLVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSATGGLYPTANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEE RGIAIGKVTDVEPTATGAEATMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKY EEEEECCCCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE LAPGQTITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLDETAQAVGGLGPALQRLVSST ECCCCCEECCCCCEEECCCHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAIVDAFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSIL HHHHHHHHCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAAPTADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTAS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ATFPNMAALDLALSINQPPPCLTGFIPAAEWRSPADTSLQPLPVGTYCKIPMDTPANSVR CCCCCCEEEEEEEECCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCHHHCC GSRNIPCVDVPGKRAASPRECRDSKPYVPLGTNPWFGDPNQLLTCPAPGARCDQPVKPGL CCCCCCEEECCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCE VIPAPTVDNGLNPAPADRLPGTPPPVSDPLSQPRSGSVQCNGQQPNTCVYTPSGPPSAVY EECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEEECCCCCCCCCC SPQSGELVGPDGVAYAVENSTKTGDDGWKEMLAPAG CCCCCCEECCCCEEEEECCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MLTPLIRRQLVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSATGGLYPTANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEE RGIAIGKVTDVEPTATGAEATMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKY EEEEECCCCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE LAPGQTITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLDETAQAVGGLGPALQRLVSST ECCCCCEECCCCCEEECCCHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAIVDAFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSIL HHHHHHHHCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAAPTADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTAS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ATFPNMAALDLALSINQPPPCLTGFIPAAEWRSPADTSLQPLPVGTYCKIPMDTPANSVR CCCCCCEEEEEEEECCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCHHHCC GSRNIPCVDVPGKRAASPRECRDSKPYVPLGTNPWFGDPNQLLTCPAPGARCDQPVKPGL CCCCCCEEECCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCE VIPAPTVDNGLNPAPADRLPGTPPPVSDPLSQPRSGSVQCNGQQPNTCVYTPSGPPSAVY EECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEEECCCCCCCCCC SPQSGELVGPDGVAYAVENSTKTGDDGWKEMLAPAG CCCCCCEECCCCEEEEECCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA