Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 221230816

GI number: 221230816

Start: 2948641

End: 2949156

Strand: Direct

Name: tadA [H]

Synonym: MLBr_02474

Alternate gene names: 221230816

Gene position: 2948641-2949156 (Clockwise)

Preceding gene: 221230815

Following gene: 221230823

Centisome position: 90.23

GC content: 63.57

Gene sequence:

>516_bases
ATGCCGAGCGCAGCGGGGCGCCGCCATCAGACCCGATCGGTTACCACTGACGAAGATTTGATCCGTGCCGCACTAACAGT
TGCCACGACGGCGGGGTCGCGCGATGTACCGATTGGGGCAGTGGTCCTCGGCGCCGACGGAAACGAACTCGCCCGGGCAG
TAAATGCCCGTGAAGCCATTGGCGATCCCACCGCGCACGCCGAAATTTTGGCAATGCGGGCGGCGGCCGGTACACTAGGC
AATGGATGGCGGCTGGAGGGGACTACGTTGGCAGTCACCGTTGAACCGTGCACCATGTGCGCGGGTGCTCTGGTCCTGGC
ACGTATCGAGCGACTGGTGTTTGGAGCCTGGCAACCCAAGACCGGAGCGGTCGGGTCGCTGTGGGATGTGGTCCGCGACC
ATAGACTCAACCATCGCCCAGCCGTACGCGGCGGAGTGCTTGCTCAGGAGTGCACAGCACCACTGGAGGCGTTCTTTGCT
CACCAGCGATTGAGTAAAGGGCCGCCGGTTCGGTAA

Upstream 100 bases:

>100_bases
ACGCCGACGAGCAACTGGGCCACATTGCCCGTGAGATGGGCTTTGCCGAGCAGCTGTCAGCGGTGATCAACCGCCTTGGT
CGGTGACCGCAAACGCAGCG

Downstream 100 bases:

>100_bases
ACTACCCAATGGTAATGGTGGTGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGACGGCAAAAACCCGTCCG
AGGGTTCAAATCCCTCCGCC

Product: putative cytidine/deoxycytidylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMRAAAGTLG
NGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRPAVRGGVLAQECTAPLEAFFA
HQRLSKGPPVR

Sequences:

>Translated_171_residues
MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMRAAAGTLG
NGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRPAVRGGVLAQECTAPLEAFFA
HQRLSKGPPVR
>Mature_170_residues
PSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMRAAAGTLGN
GWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRPAVRGGVLAQECTAPLEAFFAH
QRLSKGPPVR

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=149, Percent_Identity=45.6375838926174, Blast_Score=114, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17541138, Length=146, Percent_Identity=31.5068493150685, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17974; Mature: 17843

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHC
GDPTAHAEILAMRAAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPK
CCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
TGAVGSLWDVVRDHRLNHRPAVRGGVLAQECTAPLEAFFAHQRLSKGPPVR
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHC
GDPTAHAEILAMRAAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPK
CCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
TGAVGSLWDVVRDHRLNHRPAVRGGVLAQECTAPLEAFFAHQRLSKGPPVR
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]