Click here to switch to the map view.

The map label for this gene is ybaB [C]

Identifier: 221230730

GI number: 221230730

Start: 2761178

End: 2761528

Strand: Reverse

Name: ybaB [C]

Synonym: MLBr_02330

Alternate gene names: 221230730

Gene position: 2761528-2761178 (Counterclockwise)

Preceding gene: 221230732

Following gene: 221230729

Centisome position: 84.5

GC content: 59.83

Gene sequence:

>351_bases
ATGCAACCCGGAGGTGATATGTCGGCGCTGCTCGCCCAGGCGCAGCAGATGCAGCAGAAGCTACTGGAAACCCAACAACA
GCTCGCGAACGCGCAGGTGCATGGTCAGGGTGGTGGGGGCTTGGTCGAGGTCGTCGTCAAAGGCAGTGGAGAAGTGGTTA
GTGTCGCTATCGATCCTAAAGTCGTCGACCCTGGCGATATTGAGACCTTGCAGGACCTGATCGTCGGCGCGATGGCTGAT
GCTTCTAAGCAAGTCACCAAACTGGCTCAGGAGCGTTTGGGAGCGTTGACCAGCGCCATGCGTCCGACGGCACCGCCACC
GACCCCACCGACTTACATGGCAGGAACCTGA

Upstream 100 bases:

>100_bases
CGGCGCAAAGATAGCCTGGTGCAGTCTAAACTCGAAATTTCAAATCGCCCTAATATCTGTAGGCGAAACCAATTCGAGAC
CAAGATGCGAGGGAGCTGTC

Downstream 100 bases:

>100_bases
ATTGCATCGACGTGTTTGAGGGGCCGGTCCAGAATCTGATTGACGAGCTTGGCAAGCTGCCTGGTATTGGACCTAAAAGC
GCGCAGCGCATCGCCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQPGGDMSALLAQAQQMQQKLLETQQQLANAQVHGQGGGGLVEVVVKGSGEVVSVAIDPKVVDPGDIETLQDLIVGAMAD
ASKQVTKLAQERLGALTSAMRPTAPPPTPPTYMAGT

Sequences:

>Translated_116_residues
MQPGGDMSALLAQAQQMQQKLLETQQQLANAQVHGQGGGGLVEVVVKGSGEVVSVAIDPKVVDPGDIETLQDLIVGAMAD
ASKQVTKLAQERLGALTSAMRPTAPPPTPPTYMAGT
>Mature_116_residues
MQPGGDMSALLAQAQQMQQKLLETQQQLANAQVHGQGGGGLVEVVVKGSGEVVSVAIDPKVVDPGDIETLQDLIVGAMAD
ASKQVTKLAQERLGALTSAMRPTAPPPTPPTYMAGT

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=97, Percent_Identity=35.0515463917526, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2330_MYCLB (B8ZT20)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002504146.1
- ProteinModelPortal:   B8ZT20
- SMR:   B8ZT20
- EnsemblBacteria:   EBMYCT00000085151
- GeneID:   7326613
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000015096
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11932; Mature: 11932

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPGGDMSALLAQAQQMQQKLLETQQQLANAQVHGQGGGGLVEVVVKGSGEVVSVAIDPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCEEEEEECCE
VVDPGDIETLQDLIVGAMADASKQVTKLAQERLGALTSAMRPTAPPPTPPTYMAGT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPGGDMSALLAQAQQMQQKLLETQQQLANAQVHGQGGGGLVEVVVKGSGEVVSVAIDPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCEEEEEECCE
VVDPGDIETLQDLIVGAMADASKQVTKLAQERLGALTSAMRPTAPPPTPPTYMAGT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA