| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230622
Identifier: 221230622
GI number: 221230622
Start: 2537421
End: 2538446
Strand: Reverse
Name: 221230622
Synonym: MLBr_02135
Alternate gene names: NA
Gene position: 2538446-2537421 (Counterclockwise)
Preceding gene: 221230625
Following gene: 221230621
Centisome position: 77.67
GC content: 57.41
Gene sequence:
>1026_bases ATGGCCAGGACGCGAATGGTTCGGCGTTGGCGCAACAACATGGAGGTGCGCGATGACACCGACTATGTGGGCATGCTCAC CACATTGTCTGAGGGGTCGGTGCGGCGCAACTTCAATCCGTACACCGATATCGATTGGGAATCACCAGCGTTCGCGGTAA AGGACAACGACCCGCGGTGGATCTTGCCGGATACTGACCCGCTGGGTCGTCATCCCTGGTATCTGGCGCAGCCGGAACAA CGCAAGATCGAGATCGGGATGTGGCGTCAGGCCAACGTGGCCAAGGTTGGGCTGCACTTCGAATCCATTTTGGTCCGAGG TCTGATGAATTACACGTTTTGGATGCCGAACGGATCACCGGAGTATCGGTATTGCTTGCATGAATGTGTTGAAGAGTGCA ACCACACGATGATGTTCCAGGAAATGGTCAACCGCGTTGGCGCGGACGTTCCGGGCATGCCGCGCAGACTGCGTTGGCTT TCGCCGTTGGTGCCGTTGGTCGCCGGGCCGTTGCCGGTGGCTTTCTTCATCGGTGTGCTCGCCGGTGAGGAACCCATCGA CCACATGCAGAAGAACGTGCTACGCGAAGGCAAGTCGCTGCATCCGATCATGGAGAGGGTGATGGCCATTCACGTGGCCG AGGAGGCGCGACACATCTCCTTCGCTCACGAGTTCTTGCGTAAGCGGTTAACGCACTTGACCAAGCGACAGCTTTTCTGG GTCTCGTTGTATTATCCACTAACGATGCGGGTGTTGTGTAACGCAATCATGGTTCCGCCCAAGGCTTTCTGGCAGGAGTT CAACATTCCGCGTGAAGTCAAGAAGGAGCTGTTCTTCCGGTCACCGGAGTCACGAAAATTGTTGCGTGACATCTTCGCCG ATGTCCGGATGCTGGCCTACGACACCAGGCTTATGGAGACGCGCTCTGCGCGGCTCATGTGGCATATATGCAAGATCGAT GGGCAGCCGTCGCGTTATCGTGGTGAGCCGCAGCGTCAGCACCCGGCGACGACATCTGCCGCTTAA
Upstream 100 bases:
>100_bases TCCCGGCAACCAAGAAAGATCTGGAGAATTCCCAGTACCTACGGTACTGTATACTTTACACGTCCAGAATTAATTTATGA ACCTCATCGAGGAGGCTGTG
Downstream 100 bases:
>100_bases GCTTTACGAGTTTCTATGCCGTATATCATCACCCAGTCGTGCTGCAACGATGGGTCTTGTGTGTTTGCTTGCCCGGTGAA TTGCATTCACCCAACACCGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRWILPDTDPLGRHPWYLAQPEQ RKIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSPEYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWL SPLVPLVAGPLPVAFFIGVLAGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFW VSLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAYDTRLMETRSARLMWHICKID GQPSRYRGEPQRQHPATTSAA
Sequences:
>Translated_341_residues MARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRWILPDTDPLGRHPWYLAQPEQ RKIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSPEYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWL SPLVPLVAGPLPVAFFIGVLAGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFW VSLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAYDTRLMETRSARLMWHICKID GQPSRYRGEPQRQHPATTSAA >Mature_340_residues ARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRWILPDTDPLGRHPWYLAQPEQR KIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSPEYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWLS PLVPLVAGPLPVAFFIGVLAGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFWV SLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAYDTRLMETRSARLMWHICKIDG QPSRYRGEPQRQHPATTSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40179; Mature: 40048
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRW CCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCCEE ILPDTDPLGRHPWYLAQPEQRKIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSP ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC EYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWLSPLVPLVAGPLPVAFFIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFW CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VSLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAY EHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DTRLMETRSARLMWHICKIDGQPSRYRGEPQRQHPATTSAA HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRW CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCCEE ILPDTDPLGRHPWYLAQPEQRKIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSP ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC EYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWLSPLVPLVAGPLPVAFFIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFW CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VSLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAY EHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DTRLMETRSARLMWHICKIDGQPSRYRGEPQRQHPATTSAA HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]