| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is modD
Identifier: 221230586
GI number: 221230586
Start: 2442566
End: 2443429
Strand: Reverse
Name: modD
Synonym: MLBr_02055
Alternate gene names: 221230586
Gene position: 2443429-2442566 (Counterclockwise)
Preceding gene: 221230595
Following gene: 221230585
Centisome position: 74.77
GC content: 61.11
Gene sequence:
>864_bases ATGAATCAGGTTGACCTGGACTCGACACATCGCAAAGGATTGTGGGCGATACTGGCGATTGCCGTGGTGGCCAGCGCCAG TGCCTTTACGATGCCGTTGCCTGCGGCCGCCAACGCCGATCCCGCGCCCCTGCCGCCATCGACGGCTACGGCAGCTCCCT CACCTGCGCAGGAGATCATTACACCCCTTCCAGGCGCCCCTGTCTCGTCCGAAGCCCAACCGGGTGATCCCAATGCGCCG TCGCTCGATCCGAATGCACCATACCCACTTGCAGTCGATCCCAACGCCGGCCGAATCACCAACGCTGTCGGTGGATTTAG CTTCGTCCTTCCTGCCGGTTGGGTGGAGTCAGAGGCTTCACATCTTGACTACGGTTCGGTGCTGCTCAGCAAAGCCATCG AGCAGCCGCCCGTGCTTGGTCAGCCGACGGTGGTCGCTACCGACACCCGTATAGTGCTCGGCCGGCTGGACCAAAAGCTC TACGCCAGTGCCGAAGCCGACAACATTAAGGCCGCGGTCCGACTGGGCTCGGATATGGGTGAGTTCTACCTGCCATACCC CGGTACGCGGATCAACCAAGAAACCATTCCGCTCCACGCCAACGGGATAGCTGGAAGCGCCTCCTACTACGAGGTCAAAT TCAGCGATCCCAATAAGCCAATTGGCCAAATATGTACGAGCGTAGTCGGCTCGCCAGCGGCGAGTACCCCTGACGTGGGG CCCTCGCAGCGTTGGTTTGTGGTATGGCTCGGAACCTCGAATAACCCGGTGGACAAGGGCGCAGCCAAAGAGCTGGCTGA GTCTATCCGGTCAGAGATGGCTCCGATCCCGGCGTCGGTTTCCGCTCCGGCACCTGTTGGATAG
Upstream 100 bases:
>100_bases TCGTGAACCGGCACGTCTCGAACTGGCAAACCGGAAAACCCCCACCGCACATAAGCAAGCCGTCCTTGCGTCGCAGTAGT AACACGGTAGGTTCGTCGCC
Downstream 100 bases:
>100_bases GCCATCCGACATCCACTCCGCTGCCACTGCGGACCGTGTTTCCTTGACCCGCCGCCCGCAGAGCAAACCACTGTCGACAA TAGGCACTCATCGGTGTATA
Product: putative cell surface protein (associated with virulence)
Products: NA
Alternate protein names: Antigen 43L; FAP-L; Fibronectin attachment protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANADPAPLPPSTATAAPSPAQEIITPLPGAPVSSEAQPGDPNAP SLDPNAPYPLAVDPNAGRITNAVGGFSFVLPAGWVESEASHLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKL YASAEADNIKAAVRLGSDMGEFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICTSVVGSPAASTPDVG PSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPAPVG
Sequences:
>Translated_287_residues MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANADPAPLPPSTATAAPSPAQEIITPLPGAPVSSEAQPGDPNAP SLDPNAPYPLAVDPNAGRITNAVGGFSFVLPAGWVESEASHLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKL YASAEADNIKAAVRLGSDMGEFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICTSVVGSPAASTPDVG PSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPAPVG >Mature_287_residues MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANADPAPLPPSTATAAPSPAQEIITPLPGAPVSSEAQPGDPNAP SLDPNAPYPLAVDPNAGRITNAVGGFSFVLPAGWVESEASHLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKL YASAEADNIKAAVRLGSDMGEFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICTSVVGSPAASTPDVG PSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPAPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the apa family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APA_MYCLE (P46842)
Other databases:
- EMBL: X76501 - EMBL: AL583924 - EMBL: AL008609 - PIR: B87166 - PIR: T44744 - RefSeq: NP_302372.1 - EnsemblBacteria: EBMYCT00000028622 - GeneID: 908985 - GenomeReviews: AL450380_GR - KEGG: mle:ML2055 - NMPDR: fig|272631.1.peg.1244 - Leproma: ML2055 - GeneTree: EBGT00050000014866 - HOGENOM: HBG129027 - OMA: GEFFMPY - ProtClustDB: CLSK799389 - BioCyc: MLEP272631:ML2055-MONOMER - InterPro: IPR010801
Pfam domain/function: PF07174 FAP
EC number: NA
Molecular weight: Translated: 29559; Mature: 29559
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANADPAPLPPSTATAAPSPAQEII CCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TPLPGAPVSSEAQPGDPNAPSLDPNAPYPLAVDPNAGRITNAVGGFSFVLPAGWVESEAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCEEEECCCCCCCCCCC HLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKLYASAEADNIKAAVRLGSDMG CCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCC EFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICTSVVGSPAASTPDVG CEEECCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC PSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPAPVG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNQVDLDSTHRKGLWAILAIAVVASASAFTMPLPAAANADPAPLPPSTATAAPSPAQEII CCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TPLPGAPVSSEAQPGDPNAPSLDPNAPYPLAVDPNAGRITNAVGGFSFVLPAGWVESEAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCEEEECCCCCCCCCCC HLDYGSVLLSKAIEQPPVLGQPTVVATDTRIVLGRLDQKLYASAEADNIKAAVRLGSDMG CCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCC EFYLPYPGTRINQETIPLHANGIAGSASYYEVKFSDPNKPIGQICTSVVGSPAASTPDVG CEEECCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC PSQRWFVVWLGTSNNPVDKGAAKELAESIRSEMAPIPASVSAPAPVG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8262636; 7790081; 11234002