| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230563
Identifier: 221230563
GI number: 221230563
Start: 2388202
End: 2390181
Strand: Direct
Name: 221230563
Synonym: MLBr_01998
Alternate gene names: NA
Gene position: 2388202-2390181 (Clockwise)
Preceding gene: 221230561
Following gene: 221230565
Centisome position: 73.08
GC content: 57.63
Gene sequence:
>1980_bases ATGCAGACTGACGAGCCGACCGGAACAGCGACGTCAGCTATACGGATTCCCCCGCTGATCTCCTTGAGAACCACACTGAT GGTGGCTGGCCTGCTGGGTAACGTGGTCGCCGTTGCCGCCTACGGACTGTTTTCGCGAACTGAGCGTTATGGCGCTGTCG GCAATCCGGATCCCGGAAGTTTCATCGGCGTTGCCGAACCCGTGGGGTACTTCGGTGCGTCGCTGTCAAGTGCGCTGTGT CTTGGAGCATTGATTTACTTCGTGATGATGGTCTGGCCGCAAGCAGACGGCTTGATCGATGCTCAGGCTTTTCGGATTCA CCTTGCTGAAGAGCGTGTTTCGATCGGCTGGCTGGCGTTTGCACTGACGATGGTGGTGGTTCAGGCTGCTAACGACTCCG GTGTAACACCGGCTGAGCTTCGAACTGGCGCAGCACTATTCAATGCCATTACAACTTCGGAGACCTCACGGGCTTGGATC GTTGTGACGATCTGTGCGTTGCTTGTTACGTTGACGCTGCGAGTCATCATCCGATACTCCGACCACTTTGTGCTGCTGAT CCCCGCAGTGATTGGTGTTATCGCGACCGCGGTGACCGGTAACGCAGGGCAGGGACCGGACCATGACTACGCCACCAGCG CTGTGATTGTCTTCGCACTCGCCATTGCCGCATTGAGCGGGCTCAAGATTACCGCTGCGCTGACGGAGGTGACGCCAAGC CGCGCTGTGCTGATTGTGCAAGTTGTGTGTGGGGTGCTCGCGCTAGCGTATGGAGCCGAGCTGGTCTATCTACTTAGCCC GGGCGCGGCGATGATCGATTCGGACTTCGGTCGGCTCGGTCTGGTGGCCGGAGTGCTGGTGACCTTGGTGTGCTTCTCTG ACTGCTGGGCGTTGGTCATGGGTCGGCCGCACTCGGATCACCGGACACGTCTTACCGCACTGGCCATGATGGCCGTCACG GCGGCGACGGCGGCAATGTCTGTTCAAACTGCGCCGCGATTCCTCACCCACAGGTTCACAGCCTGGGACGTTTTTCTGGG CTACGAGCTGCCGCAGCCACCTAACATTGTTAGGTTTTTCACCGTGTGGCGGTTCGACAGCCTCATTGGAGCTACTGCCA TCGTCCTCGGGATCGGATATGTAGCGGGCTTTGTCCGTGTGCGGCGTGCCGGCAACACTTGGCCAGTGGGGAGACTGGTG GCGTGGTTGACTGGGTGTGTCGCACTGGTATTCACCAGTAGCTCAGGCGTGCGAACGTACGGTTCGGCGATGTTCAGCGT GCACATGGCCGAACATATGACGTTGAATATGTTCATCCCGGTCCTCCTTGTTCTGGGCGGTCCGGTCACCTTGGCGCTTC GTGCTTTGTCCGCGGCTGGTGATGGACAACAACCCGGACCACGTGAATGGCTAACATGGCTAATGCACTCCTCCGTTACG GCCTTTCTTTCCCACCCGGTCACAAACTTCATCCTGTTCGTGGGGTCGCCGTACATCGTTTACTTCACACCGCTGTTCGA TACCCTGGTTCGCTATCACTGGGGACACGAATTCATGGCCATCCACTTCTTGCTGGTAGGATATATCTTCTACTGGGCAA TAATTGGTATCGATCCAGGGCCCCGACGACTCCCCTATCTGGCACGAATTGGATTGTTGTTTGCAGTGATGCCATTCCAC GCCTTCTTCGGGATAGCGTTAATGACAATGACATCGGCAATCAGTGCCGAATTCTACCGCTCCGTCAATCTGCCCTGGCT GGCAAGCATTGACGCTGACCAGCATATAGGTGGAGCGATCGCCTGGAGCGCAACGGAATTACCTGTAATCATCGTCATAG TGGCGCTGATGGCCCAGTGGGCACGCCAGGACCATAGAGTCGCCGTCCGTGAAGACCGGCATGCGGACAGCACCTACGCC GATGACGACCTAAATGCATACAACGCGATGCTACGAGAGTTGTCCCGGATGCGTCGATAG
Upstream 100 bases:
>100_bases CGCTCGGAGGGAGGCATCTGGCTACTGTAGGTTGGCGTTGACCAACCGACGCTTGCCGGCCACCTACGTGGTCTGCTGTT AGCATCCGTAAGCTCAAGCA
Downstream 100 bases:
>100_bases ACAAGACCACCCGTTGTCGATGATACGACCTGACGCCCAGGCATGTGGTAGTCATTGTCGAGGATGTGACTGTCCTGGTC AGGTCCAAGATTGCGGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGSFIGVAEPVGYFGASLSSALC LGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAFALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWI VVTICALLVTLTLRVIIRYSDHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVMGRPHSDHRTRLTALAMMAVT AATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIVRFFTVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLV AWLTGCVALVFTSSSGVRTYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHSSVT AFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGIDPGPRRLPYLARIGLLFAVMPFH AFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIGGAIAWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYA DDDLNAYNAMLRELSRMRR
Sequences:
>Translated_659_residues MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGSFIGVAEPVGYFGASLSSALC LGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAFALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWI VVTICALLVTLTLRVIIRYSDHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVMGRPHSDHRTRLTALAMMAVT AATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIVRFFTVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLV AWLTGCVALVFTSSSGVRTYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHSSVT AFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGIDPGPRRLPYLARIGLLFAVMPFH AFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIGGAIAWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYA DDDLNAYNAMLRELSRMRR >Mature_659_residues MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGSFIGVAEPVGYFGASLSSALC LGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAFALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWI VVTICALLVTLTLRVIIRYSDHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVMGRPHSDHRTRLTALAMMAVT AATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIVRFFTVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLV AWLTGCVALVFTSSSGVRTYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHSSVT AFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGIDPGPRRLPYLARIGLLFAVMPFH AFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIGGAIAWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYA DDDLNAYNAMLRELSRMRR
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0102
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1998_MYCLE (P53525)
Other databases:
- EMBL: Z46257 - EMBL: AL583924 - PIR: S77658 - RefSeq: NP_302349.1 - ProteinModelPortal: P53525 - EnsemblBacteria: EBMYCT00000027912 - GeneID: 909080 - GenomeReviews: AL450380_GR - KEGG: mle:ML1998 - NMPDR: fig|272631.1.peg.1221 - Leproma: ML1998 - GeneTree: EBGT00050000017144 - HOGENOM: HBG579710 - OMA: AWRWTAI - ProtClustDB: CLSK790265 - BioCyc: MLEP272631:ML1998-MONOMER - InterPro: IPR008457 - InterPro: IPR019108
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD
EC number: NA
Molecular weight: Translated: 71247; Mature: 71247
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x29979108)-; HASH(0x234afb98)-; HASH(0x238924fc)-; HASH(0x228cac6c)-; HASH(0x23208a58)-; HASH(0x2374aadc)-; HASH(0x2374abfc)-; HASH(0x23468fcc)-; HASH(0x22e555ec)-; HASH(0x23654314)-; HASH(0x2308bbf0)-; HASH(0x23ba3acc)-; HASH(0x22904778)-; HASH(0x239227b0)-; HASH(0x2187b194)-; HASH(0x22b3ae1c)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGS CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FIGVAEPVGYFGASLSSALCLGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEHHHHHHHHHHHH ALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWIVVTICALLVTLTLRVIIRYS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS CCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCC RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVM HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GRPHSDHRTRLTALAMMAVTAATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIVRFF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEHH TVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLVAWLTGCVALVFTSSSGVRTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH GSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHSSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGIDPG HHHHCCHHHEEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC PRRLPYLARIGLLFAVMPFHAFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIGGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEE AWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYADDDLNAYNAMLRELSRMRR EECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCH >Mature Secondary Structure MQTDEPTGTATSAIRIPPLISLRTTLMVAGLLGNVVAVAAYGLFSRTERYGAVGNPDPGS CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FIGVAEPVGYFGASLSSALCLGALIYFVMMVWPQADGLIDAQAFRIHLAEERVSIGWLAF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEHHHHHHHHHHHH ALTMVVVQAANDSGVTPAELRTGAALFNAITTSETSRAWIVVTICALLVTLTLRVIIRYS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DHFVLLIPAVIGVIATAVTGNAGQGPDHDYATSAVIVFALAIAALSGLKITAALTEVTPS CCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCC RAVLIVQVVCGVLALAYGAELVYLLSPGAAMIDSDFGRLGLVAGVLVTLVCFSDCWALVM HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GRPHSDHRTRLTALAMMAVTAATAAMSVQTAPRFLTHRFTAWDVFLGYELPQPPNIVRFF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEHH TVWRFDSLIGATAIVLGIGYVAGFVRVRRAGNTWPVGRLVAWLTGCVALVFTSSSGVRTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH GSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRALSAAGDGQQPGPREWLTWLMHSSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AFLSHPVTNFILFVGSPYIVYFTPLFDTLVRYHWGHEFMAIHFLLVGYIFYWAIIGIDPG HHHHCCHHHEEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC PRRLPYLARIGLLFAVMPFHAFFGIALMTMTSAISAEFYRSVNLPWLASIDADQHIGGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEE AWSATELPVIIVIVALMAQWARQDHRVAVREDRHADSTYADDDLNAYNAMLRELSRMRR EECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476188; 11234002