| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230562
Identifier: 221230562
GI number: 221230562
Start: 2387457
End: 2388089
Strand: Reverse
Name: 221230562
Synonym: MLBr_01997
Alternate gene names: NA
Gene position: 2388089-2387457 (Counterclockwise)
Preceding gene: 221230564
Following gene: 221230555
Centisome position: 73.07
GC content: 55.92
Gene sequence:
>633_bases ATGATTGATGACTTACTGCTGCGTTGGGTTGTCACCGGGCTGTTCGTGCTGAGCGCTGCCGAATGTGGCTTCGCGTGTTT GGCCTGCCGCCGGCCGTGGACACTGGTTCCGAGCAATGGATTGCATTTTGCGATGGCAATCGCGATGGCAGTGATGGCCT GGCCGCGGGGTGCTCAGCTACCAACGACAGGGACCGTGGTGTTTTGCGGGCTAGTTGGGGCGTGGTTCGTGATCTTGGCC ACCGTTTCGTCCCGAAGGATCGCTGAACGGGCGGCATATGCATATCCGGCTCTCATGATGCTGGCTATGGTCTGGATGTA CGTCATCATGGACAGTCATCTTCACGACCATTGGGCCACTGGCCATCATACATCGCCCCATACGTCGATGCTGGGCGTGG ACATGACTACAACGGTGGTGCCGGCAAGCGGAATACCTGGATGGATCAGTATTATAAACTGGCTCTGGTTCGCGTTCTTC TGTATCGCGACAGTCTTCTGGACGTACCGTTCTTTCGCGACATCGCGAAGGAATGCAGGCTTCAGTCGCTATTGTTCGCT GCATCCCTCAGGTCAGGCTATGATGTCGACCGGGATGGCTATTATGTTCGGTGTTCTGCTGTTTCACGTTTAG
Upstream 100 bases:
>100_bases CGGATGCTAACAGCAGACCACGTAGGTGGCCGGCAAGCGTCGGTTGGTCAACGCCAACCTACAGTAGCCAGATGCCTCCC TCCGAGCGGCGACACCTCGC
Downstream 100 bases:
>100_bases CAGTTGCTATCTGCCAGTATATTTCAGTGGCTGTGAACATCCGTGCGCTAGTAGGGCTCGAATCGACTCTGGTGGCGCGG CAAGCTCGGCGACGGACTCG
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIDDLLLRWVVTGLFVLSAAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQLPTTGTVVFCGLVGAWFVILA TVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHLHDHWATGHHTSPHTSMLGVDMTTTVVPASGIPGWISIINWLWFAFF CIATVFWTYRSFATSRRNAGFSRYCSLHPSGQAMMSTGMAIMFGVLLFHV
Sequences:
>Translated_210_residues MIDDLLLRWVVTGLFVLSAAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQLPTTGTVVFCGLVGAWFVILA TVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHLHDHWATGHHTSPHTSMLGVDMTTTVVPASGIPGWISIINWLWFAFF CIATVFWTYRSFATSRRNAGFSRYCSLHPSGQAMMSTGMAIMFGVLLFHV >Mature_210_residues MIDDLLLRWVVTGLFVLSAAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQLPTTGTVVFCGLVGAWFVILA TVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHLHDHWATGHHTSPHTSMLGVDMTTTVVPASGIPGWISIINWLWFAFF CIATVFWTYRSFATSRRNAGFSRYCSLHPSGQAMMSTGMAIMFGVLLFHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23262; Mature: 23262
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDLLLRWVVTGLFVLSAAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCC PTTGTVVFCGLVGAWFVILATVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHLHDHWAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHHTSPHTSMLGVDMTTTVVPASGIPGWISIINWLWFAFFCIATVFWTYRSFATSRRNAG CCCCCCCCCEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSRYCSLHPSGQAMMSTGMAIMFGVLLFHV HHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDDLLLRWVVTGLFVLSAAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCC PTTGTVVFCGLVGAWFVILATVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHLHDHWAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHHTSPHTSMLGVDMTTTVVPASGIPGWISIINWLWFAFFCIATVFWTYRSFATSRRNAG CCCCCCCCCEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSRYCSLHPSGQAMMSTGMAIMFGVLLFHV HHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]