| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is yaeL [C]
Identifier: 221230307
GI number: 221230307
Start: 1906917
End: 1908131
Strand: Reverse
Name: yaeL [C]
Synonym: MLBr_01582
Alternate gene names: 221230307
Gene position: 1908131-1906917 (Counterclockwise)
Preceding gene: 221230308
Following gene: 221230306
Centisome position: 58.39
GC content: 58.68
Gene sequence:
>1215_bases ATGATGTTCGCTCTCGGCATTGTGCTGTTCGCTATCGCCATTCTTATTTCGGTGGCCCTGCACGAATGTGGCCACTTGTG GGTGGCGTGCGCCACTGGCATGAAGGTGCGTCGTTATTTTGTTGGTTTCGGCCCCACCCTCTGGTCGACCCGGCGCGGTG AAACCCAATATGGTATCAAGGCCGTTCCGCTAGGCGGTTTTTGTGATATCGTCGGTATGACCTCGGTTGAGAAGCTGGAG CCTGACGAATCTGACCGAGCAATGTACAAACAAGCGACCTGGAAGCGGGTGGCGGTACTGTTCGCCGGACCTGCTATGAA CTTTGTGATCTGCCTGGTGCTGATCTATGGCATCGCGCTGGTCTGGGGGCTACCCAACCTGCACATGCCTACCAGGGCTG TAATCGGTGAAACTGCTTGTGTAGCATCGGAACTGGACCAGGGCAAGCTCGGAAACTGCACTGGCCCAGGTCCGGCGGCG CTGGCCGGACTCCGTGCTGGCGACGTCGTCGTCAAGATCGGTGATACTACGGTGTCGACCTTCGATGACATGGCCGCTGT GGTGCGTAAGTTGCATGGTACGGTGCCGATTGTCTTCGAACGGGACGGCACTGCGATTACTAGCTACGTCGACATCACGC CTACCCAGCGCTATATGTCCAAAGGAAAGGGTAGTCAACTCGAACCAGCCACGGTCGGTGCCATTGGAGTCGGCGCACAC CATCTGCTGCCCACGCATTACGGCGTATTCTCCGCTTTGCCCGCCACCGCCGCTTTCGCCGGGGATTTGACCGTCGAGGT GGGCAAGGCTCTGGTCACCATACCGACCAAGCTGGGTGCCTTGGTGCACGCTATCGGTGGTGGACAGCGTGACCCGCAGA CGCCGATGAGTGTGGTCGGCGCCAGCATCATCGGCGGCGACACCGTCGATCATGGGCTGTGGGTGGCGTTCTGGTTTTTC TTGGCGCAGCTGAACCTTATTCTGGGTGCCATCAACCTGGTGCCGTTGCTGCCTTTCGATGGCGGCCACATCGCCATTGC CGTATTCGAGAGGATCCGTAACCTCATCCGGTCCGCACGTGGCGTGGTCGTGGCCGCGCCGGTGAACTATCTCAAGCTCA TGCCCGCGACCTATGTGGTCTTGGTCTTTGTAGTCGGGTATGTGCTGTTGACCGTGACCGCCGATCTGGTAAACCCAATC AGGCTTTTTCAATAG
Upstream 100 bases:
>100_bases ACGCGCAGCGCTGGGCCCGTGAGCGAGCGTTGTGTGCGGTAGCAACAGCGAGTTCTGGAAAGGTCTCTGACATGGTCTTA GAAAGGTCCTAAAAGGCTCG
Downstream 100 bases:
>100_bases CCAATAGTGAAAAACGAGAAAGCCAATAGTGAAAACCGAGAAATGGGGAACAGTGAACATGCGTCTGGGCATGCCCGAGG CTCCGGCTCCCGGGCTTGCC
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MMFALGIVLFAIAILISVALHECGHLWVACATGMKVRRYFVGFGPTLWSTRRGETQYGIKAVPLGGFCDIVGMTSVEKLE PDESDRAMYKQATWKRVAVLFAGPAMNFVICLVLIYGIALVWGLPNLHMPTRAVIGETACVASELDQGKLGNCTGPGPAA LAGLRAGDVVVKIGDTTVSTFDDMAAVVRKLHGTVPIVFERDGTAITSYVDITPTQRYMSKGKGSQLEPATVGAIGVGAH HLLPTHYGVFSALPATAAFAGDLTVEVGKALVTIPTKLGALVHAIGGGQRDPQTPMSVVGASIIGGDTVDHGLWVAFWFF LAQLNLILGAINLVPLLPFDGGHIAIAVFERIRNLIRSARGVVVAAPVNYLKLMPATYVVLVFVVGYVLLTVTADLVNPI RLFQ
Sequences:
>Translated_404_residues MMFALGIVLFAIAILISVALHECGHLWVACATGMKVRRYFVGFGPTLWSTRRGETQYGIKAVPLGGFCDIVGMTSVEKLE PDESDRAMYKQATWKRVAVLFAGPAMNFVICLVLIYGIALVWGLPNLHMPTRAVIGETACVASELDQGKLGNCTGPGPAA LAGLRAGDVVVKIGDTTVSTFDDMAAVVRKLHGTVPIVFERDGTAITSYVDITPTQRYMSKGKGSQLEPATVGAIGVGAH HLLPTHYGVFSALPATAAFAGDLTVEVGKALVTIPTKLGALVHAIGGGQRDPQTPMSVVGASIIGGDTVDHGLWVAFWFF LAQLNLILGAINLVPLLPFDGGHIAIAVFERIRNLIRSARGVVVAAPVNYLKLMPATYVVLVFVVGYVLLTVTADLVNPI RLFQ >Mature_404_residues MMFALGIVLFAIAILISVALHECGHLWVACATGMKVRRYFVGFGPTLWSTRRGETQYGIKAVPLGGFCDIVGMTSVEKLE PDESDRAMYKQATWKRVAVLFAGPAMNFVICLVLIYGIALVWGLPNLHMPTRAVIGETACVASELDQGKLGNCTGPGPAA LAGLRAGDVVVKIGDTTVSTFDDMAAVVRKLHGTVPIVFERDGTAITSYVDITPTQRYMSKGKGSQLEPATVGAIGVGAH HLLPTHYGVFSALPATAAFAGDLTVEVGKALVTIPTKLGALVHAIGGGQRDPQTPMSVVGASIIGGDTVDHGLWVAFWFF LAQLNLILGAINLVPLLPFDGGHIAIAVFERIRNLIRSARGVVVAAPVNYLKLMPATYVVLVFVVGYVLLTVTADLVNPI RLFQ
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain
Homologues:
Organism=Escherichia coli, GI1786373, Length=247, Percent_Identity=29.1497975708502, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1582_MYCLE (Q9CBU4)
Other databases:
- EMBL: AL583922 - PIR: H87106 - RefSeq: NP_302093.1 - ProteinModelPortal: Q9CBU4 - SMR: Q9CBU4 - MEROPS: M50.005 - EnsemblBacteria: EBMYCT00000028367 - GeneID: 909642 - GenomeReviews: AL450380_GR - KEGG: mle:ML1582 - NMPDR: fig|272631.1.peg.965 - Leproma: ML1582 - GeneTree: EBGT00050000017531 - HOGENOM: HBG664087 - OMA: GETEYGL - ProtClustDB: CLSK872116 - BioCyc: MLEP272631:ML1582-MONOMER - GO: GO:0006508 - InterPro: IPR001478 - InterPro: IPR008915 - SMART: SM00228
Pfam domain/function: PF02163 Peptidase_M50; SSF50156 PDZ
EC number: NA
Molecular weight: Translated: 42876; Mature: 42876
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50106 PDZ; PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 22-22
Signals:
None
Transmembrane regions:
HASH(0x2a1356a8)-; HASH(0x29e1c28c)-; HASH(0x29e123a4)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFALGIVLFAIAILISVALHECGHLWVACATGMKVRRYFVGFGPTLWSTRRGETQYGIK CHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCHHHHHHHHCCCCHHCCCCCCCCCCCEE AVPLGGFCDIVGMTSVEKLEPDESDRAMYKQATWKRVAVLFAGPAMNFVICLVLIYGIAL EECCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHH VWGLPNLHMPTRAVIGETACVASELDQGKLGNCTGPGPAALAGLRAGDVVVKIGDTTVST HHCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCHHHH FDDMAAVVRKLHGTVPIVFERDGTAITSYVDITPTQRYMSKGKGSQLEPATVGAIGVGAH HHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEECCCHH HLLPTHYGVFSALPATAAFAGDLTVEVGKALVTIPTKLGALVHAIGGGQRDPQTPMSVVG HHCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH ASIIGGDTVDHGLWVAFWFFLAQLNLILGAINLVPLLPFDGGHIAIAVFERIRNLIRSAR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHC GVVVAAPVNYLKLMPATYVVLVFVVGYVLLTVTADLVNPIRLFQ CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MMFALGIVLFAIAILISVALHECGHLWVACATGMKVRRYFVGFGPTLWSTRRGETQYGIK CHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCHHHHHHHHCCCCHHCCCCCCCCCCCEE AVPLGGFCDIVGMTSVEKLEPDESDRAMYKQATWKRVAVLFAGPAMNFVICLVLIYGIAL EECCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHH VWGLPNLHMPTRAVIGETACVASELDQGKLGNCTGPGPAALAGLRAGDVVVKIGDTTVST HHCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCHHHH FDDMAAVVRKLHGTVPIVFERDGTAITSYVDITPTQRYMSKGKGSQLEPATVGAIGVGAH HHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEECCCHH HLLPTHYGVFSALPATAAFAGDLTVEVGKALVTIPTKLGALVHAIGGGQRDPQTPMSVVG HHCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH ASIIGGDTVDHGLWVAFWFFLAQLNLILGAINLVPLLPFDGGHIAIAVFERIRNLIRSAR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHC GVVVAAPVNYLKLMPATYVVLVFVVGYVLLTVTADLVNPIRLFQ CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002