| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is mshB
Identifier: 221230264
GI number: 221230264
Start: 1801817
End: 1802743
Strand: Reverse
Name: mshB
Synonym: MLBr_01495
Alternate gene names: 221230264
Gene position: 1802743-1801817 (Counterclockwise)
Preceding gene: 221230265
Following gene: 221230263
Centisome position: 55.16
GC content: 61.49
Gene sequence:
>927_bases ATGTCTGAGACGCCGCGGCTACTGTTCGTGCATGCCCATCCCGACGATGAGAGCCTCAGCAACGGTGCTACCATCGCACA CTACACCTCGCGTGGGGCGCAAGTGCAGGTTGTCACGTGCACACTCGGTGAGGAAGGCGAGGTCATCGGGGACCGCTGGG CGGAGCTCACCGTCGATCATGCGGACCAACTCGGTGGCTACCGAATCTTTGAGCTCACCGAAGCGTTGCGGGCGTTGGGG GTCAGCGCACCCATTTATCTTGGTGGCGCGGGTCGCTGGCGCGACTCGGGCATGCGCGGCACCGCGCCGCGGCGTCGTCA GCGGTTCATCGACGCCGACGAAAACGAGGCCGTCGGGGCCCTGGTTGCGATCATCCGCGAACTGCGTCCACACGTCGTGG TGACATATGATCCCCACGGGGGGTACGGCCATCCCGACCATGTCCACACCCACTTTATTACCGCAGCCGCGGTGGCTTCT TCTGGCGTTGCGGCCGGCCTAGAGGTCGGTGCCGATGAATACCCGGGCAAGCCGTGGAAGGTACCGAAGTTCTACTGGTC CGTCTTCGCCCTCAGCGCATTTGAAGCTGGGATGAACGCGCTGCAGGGCAAAGATTTGCGGCCCGAGTGGACGATCCCGC CGCGTGAAGAGTTCTATTTCGGATATTCAGATAAGGACATAGATGCTGTCGTCGAAGCAACCTCAGATGTATGGGCAGCC AAGACGGCGGCTTTGACGGCACACGCCACCCAAGTCGTCGTTGGCCCGACCGGCCGGGCCTGTGCCTTGTCGAACAACAT GGTGATGCCAATTTTCGCACAAGAGCACTATGTTCTCGCCGCCGGCTCCGCGGGAAATCGCGATGAGCGCGGTTGGGAAA CTGATTTGCTAGCGGGACTATGTCTGGATGGATTTGATGCGCGGTAA
Upstream 100 bases:
>100_bases AGCGCGGAGCACTTGACATCGTCTATATGGGTTAAGTAAGGGATTAGAAGCAATTAAAGTGACTTTCGACGACGTTTAGT GTTCCGGTTAGGGTGCGTCC
Downstream 100 bases:
>100_bases ACTGCCAATAAGGTATCTGCGGAAGGAACTGGTTGTGTACCCCGACCTGCAGCATTGGCAGGACCGACTCGACAGTCTGC CGTGGGAAATCGCATCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHADQLGGYRIFELTEALRALG VSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGALVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVAS SGVAAGLEVGADEYPGKPWKVPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWAA KTAALTAHATQVVVGPTGRACALSNNMVMPIFAQEHYVLAAGSAGNRDERGWETDLLAGLCLDGFDAR
Sequences:
>Translated_308_residues MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHADQLGGYRIFELTEALRALG VSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGALVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVAS SGVAAGLEVGADEYPGKPWKVPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWAA KTAALTAHATQVVVGPTGRACALSNNMVMPIFAQEHYVLAAGSAGNRDERGWETDLLAGLCLDGFDAR >Mature_307_residues SETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHADQLGGYRIFELTEALRALGV SAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGALVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVASS GVAAGLEVGADEYPGKPWKVPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWAAK TAALTAHATQVVVGPTGRACALSNNMVMPIFAQEHYVLAAGSAGNRDERGWETDLLAGLCLDGFDAR
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSHB_MYCLB (B8ZRQ3)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002503680.1 - ProteinModelPortal: B8ZRQ3 - SMR: B8ZRQ3 - EnsemblBacteria: EBMYCT00000086033 - GeneID: 7326913 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000016794 - HOGENOM: HBG666753 - OMA: KFYWTVT - ProtClustDB: CLSK790994 - HAMAP: MF_01696 - InterPro: IPR003737 - InterPro: IPR017810 - PANTHER: PTHR12993 - TIGRFAMs: TIGR03445
Pfam domain/function: PF02585 PIG-L
EC number: =3.5.1.103
Molecular weight: Translated: 33346; Mature: 33214
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDH CCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHEEEECH ADQLGGYRIFELTEALRALGVSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGA HHHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH LVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVASSGVAAGLEVGADEYPGKPWK HHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC VPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWAA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHH KTAALTAHATQVVVGPTGRACALSNNMVMPIFAQEHYVLAAGSAGNRDERGWETDLLAGL HHHEEEEECEEEEECCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHH CLDGFDAR HCCCCCCC >Mature Secondary Structure SETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDH CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHEEEECH ADQLGGYRIFELTEALRALGVSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGA HHHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH LVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVASSGVAAGLEVGADEYPGKPWK HHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC VPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWAA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHH KTAALTAHATQVVVGPTGRACALSNNMVMPIFAQEHYVLAAGSAGNRDERGWETDLLAGL HHHEEEEECEEEEECCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHH CLDGFDAR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA