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The map label for this gene is ybfF [C]

Identifier: 221230232

GI number: 221230232

Start: 1733572

End: 1734405

Strand: Reverse

Name: ybfF [C]

Synonym: MLBr_01440

Alternate gene names: 221230232

Gene position: 1734405-1733572 (Counterclockwise)

Preceding gene: 221230233

Following gene: 221230229

Centisome position: 53.07

GC content: 57.91

Gene sequence:

>834_bases
ATGATCACCGGCCAGCCTGCGCGCAAGATATCGGGTAATCGTCCCAGTCAGTGCGTCCTGGTAATCATCCCCACATTCAA
TGAGTTGGAGAACCTTCCGGTGACCCATGGGCGACTAAAGGACGCATACCCAGAGATACACGTGCTCATTGTGGACGACG
GCAGTCCCGATGGCACTGGAGAACTTGCCGACGAGCTGGCACAGGTCGACCCGGGTTGTACCCACGTGATGCACCGCACC
ACTAAGGATGGTCTGGGTACGGCGTATCTAGCAGGGTTTGCCTGGGGTATGAGTCGGGACTACTCGGTGCTGGTGGAGAT
GGATGCGGACGGAAGTCACGCGCCCGAACAACTACACCGTCTACTCGGTGCCGTCGACGCCGGAGCCGACCTTGCTATCG
GTTCGCGCTATGTCAATGGGGGGACAGTGCGGAACTGGCCGTGGCAGCGCCTGGCTTTGTCTAAGACGGCCAACAAATAT
TCGCGGTTGGCGCTCGGCATCGACGTCCACGACATCACCGCCGGCTATCGTGCCTATCGCCGCGAAGTGCTCGAGGCAAT
CGATCTTGACAGTGTGGCCTCAAAGGGTTATTGCTTCCAGATCGATCTCACTTGGCGCACTGTGAACAACGGGTTCGTGA
TCATCGAAGTGCCGATTACTTTTACCGAGCGTGAATTTGGTCTGTCTAAAATGAGCGGATCCAACATTCGCGAGGCACTG
GTCAAAGTGACTCGATGGGGTATCGATGGACGAATCCAACGCGCTCGAACAGGGCGTGCGTATAACTCGGTCAGCCGCGG
CGGCGGGACCGGATCAAGTCCAAGCGCTCCTTGA

Upstream 100 bases:

>100_bases
ATCGACCGCTAATCCACCTGAGCCGGCTGGTGACTACACTCCGCTCTATCTATAAGGGCGGCCAAAAGCCACGTTATTTC
GGGCGACACAAAGGAGCTAA

Downstream 100 bases:

>100_bases
GTAGTTCTTCGAGCTCCTCGATGGAGCGGCGCTCCAACAGCATGTCCCAGTGCGTACGCGGGGGCTTGACCATCTTCGGC
TCAGGCAGGTCACCCTCGAT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MITGQPARKISGNRPSQCVLVIIPTFNELENLPVTHGRLKDAYPEIHVLIVDDGSPDGTGELADELAQVDPGCTHVMHRT
TKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHRLLGAVDAGADLAIGSRYVNGGTVRNWPWQRLALSKTANKY
SRLALGIDVHDITAGYRAYRREVLEAIDLDSVASKGYCFQIDLTWRTVNNGFVIIEVPITFTEREFGLSKMSGSNIREAL
VKVTRWGIDGRIQRARTGRAYNSVSRGGGTGSSPSAP

Sequences:

>Translated_277_residues
MITGQPARKISGNRPSQCVLVIIPTFNELENLPVTHGRLKDAYPEIHVLIVDDGSPDGTGELADELAQVDPGCTHVMHRT
TKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHRLLGAVDAGADLAIGSRYVNGGTVRNWPWQRLALSKTANKY
SRLALGIDVHDITAGYRAYRREVLEAIDLDSVASKGYCFQIDLTWRTVNNGFVIIEVPITFTEREFGLSKMSGSNIREAL
VKVTRWGIDGRIQRARTGRAYNSVSRGGGTGSSPSAP
>Mature_277_residues
MITGQPARKISGNRPSQCVLVIIPTFNELENLPVTHGRLKDAYPEIHVLIVDDGSPDGTGELADELAQVDPGCTHVMHRT
TKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHRLLGAVDAGADLAIGSRYVNGGTVRNWPWQRLALSKTANKY
SRLALGIDVHDITAGYRAYRREVLEAIDLDSVASKGYCFQIDLTWRTVNNGFVIIEVPITFTEREFGLSKMSGSNIREAL
VKVTRWGIDGRIQRARTGRAYNSVSRGGGTGSSPSAP

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=223, Percent_Identity=35.8744394618834, Blast_Score=134, Evalue=8e-32,
Organism=Escherichia coli, GI1788588, Length=227, Percent_Identity=29.5154185022026, Blast_Score=81, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71999402, Length=221, Percent_Identity=37.5565610859729, Blast_Score=137, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6325441, Length=232, Percent_Identity=31.4655172413793, Blast_Score=83, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24585265, Length=222, Percent_Identity=36.4864864864865, Blast_Score=135, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30141; Mature: 30141

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITGQPARKISGNRPSQCVLVIIPTFNELENLPVTHGRLKDAYPEIHVLIVDDGSPDGTG
CCCCCCCHHCCCCCCCCEEEEEECCCHHHHCCCCCCCCHHCCCCEEEEEEEECCCCCCCH
ELADELAQVDPGCTHVMHRTTKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHR
HHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
LLGAVDAGADLAIGSRYVNGGTVRNWPWQRLALSKTANKYSRLALGIDVHDITAGYRAYR
HHHHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH
REVLEAIDLDSVASKGYCFQIDLTWRTVNNGFVIIEVPITFTEREFGLSKMSGSNIREAL
HHHHHHHCHHHHCCCCEEEEEEEEEEEECCCEEEEEEEEEEECHHCCCHHCCCCHHHHHH
VKVTRWGIDGRIQRARTGRAYNSVSRGGGTGSSPSAP
HHHHHCCCCCEEHHHHCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MITGQPARKISGNRPSQCVLVIIPTFNELENLPVTHGRLKDAYPEIHVLIVDDGSPDGTG
CCCCCCCHHCCCCCCCCEEEEEECCCHHHHCCCCCCCCHHCCCCEEEEEEEECCCCCCCH
ELADELAQVDPGCTHVMHRTTKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHR
HHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
LLGAVDAGADLAIGSRYVNGGTVRNWPWQRLALSKTANKYSRLALGIDVHDITAGYRAYR
HHHHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH
REVLEAIDLDSVASKGYCFQIDLTWRTVNNGFVIIEVPITFTEREFGLSKMSGSNIREAL
HHHHHHHCHHHHCCCCEEEEEEEEEEEECCCEEEEEEEEEEECHHCCCHHCCCCHHHHHH
VKVTRWGIDGRIQRARTGRAYNSVSRGGGTGSSPSAP
HHHHHCCCCCEEHHHHCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]