| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is yesP [H]
Identifier: 221230228
GI number: 221230228
Start: 1713410
End: 1714369
Strand: Reverse
Name: yesP [H]
Synonym: MLBr_01426
Alternate gene names: 221230228
Gene position: 1714369-1713410 (Counterclockwise)
Preceding gene: 221230229
Following gene: 221230227
Centisome position: 52.46
GC content: 53.65
Gene sequence:
>960_bases ATGACATCGGTCGAGACCACAGCGGTACCCGAGCCTAGTATCGCTAAAAACCACGCCAGCTTGCCGCCTTCGCGCCGGCG CGCGTGGGCCGGTCGCATGTTCATCGCACCTAATCTGGCTTCGGTCTCAGTCTTTATGCTGTTTCCGCTCGGATTCTCGC TGTATATGAGCTTTCAGAAGTGGGACATGTTCACCCCGCCGGTGTTCGTGGGTCTGGCGAATTTCCAAAATCTCTTCACT TCAGATCCGCTGTTTCTCATCGCGCTGTGCAACAGTGTGGTTTTCACTGTTGGGACGGTCATACCGACCGTCCTGATCAG TCTGGTAGTTGCCGGTGTGCTTAACCAGAAAGTCAAGGGAATCGGGATCTTTCGAACGATTGTCTTCTTGCCACTGGCCA TTTCCTCAGTGGTGATGGCGGTCGTTTGGCAGTTCATCTTCAATACCCATAACGGGCTGCTCAACATCATGCTCGGCTGG ATTGGCATCGGCCCAATTCCCTGGTTGGTGAACCCTGGATGGGCGATGGCCTCGCTTTGCATTGTCAGCGTTTGGCGGAG CGTGCCGTTTGCCACCGTCGTCTTGTTGGCAGCGATGCAGGAGGTTCCCAAGACAGTTTACGAGGCGGCCAAAATTGATG GTGCAGGCGAGATAAGACAATTCATATCCATCACTGTGCCTTTTATCCGCGGGGCAATCTCGTTTGTGGTGGTCATTTCG TTCATTCACGCGTTTCAGACATTTGACCTGGTGTACGTGCTTAATGGCCCAAACGGCGGTCCAGAATTGGCGACCTATGT GTTAGGCATCATGTTGTTCCAGCACGCGTTTTCGTTCCTAGAATTCGGTTATGCGTCGGCGCTGGCGTTGGTGACGTTCG CAATCTTGTTGGTGTTAATCGTGTTGCAGTTGCTGCTGAACCGACGGCATTCGTGGGAGGTTTCTGGTGGGCTTAGCTGA
Upstream 100 bases:
>100_bases CCTTGATGGATCGTAACTTCGGACCTGTGCTGCGAGGAGTCCGGCCGGCGACATCGCTGGCCGGACTCGCACGCGCTGTC GACGAGGTGTTGAATAGTCC
Downstream 100 bases:
>100_bases GCGACTCAACCATATAGTTAAGCGCAGTGTCTTGCGTGCGGTGGTCGTTTACATAGCGCTGACCGGCATCGCGTGGTGCG CCCTGTTCCCCATTGTCTGG
Product: putative ABC-transport protein, inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPVFVGLANFQNLFT SDPLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMAVVWQFIFNTHNGLLNIMLGW IGIGPIPWLVNPGWAMASLCIVSVWRSVPFATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVIS FIHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALALVTFAILLVLIVLQLLLNRRHSWEVSGGLS
Sequences:
>Translated_319_residues MTSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPVFVGLANFQNLFT SDPLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMAVVWQFIFNTHNGLLNIMLGW IGIGPIPWLVNPGWAMASLCIVSVWRSVPFATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVIS FIHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALALVTFAILLVLIVLQLLLNRRHSWEVSGGLS >Mature_318_residues TSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPVFVGLANFQNLFTS DPLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMAVVWQFIFNTHNGLLNIMLGWI GIGPIPWLVNPGWAMASLCIVSVWRSVPFATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVISF IHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALALVTFAILLVLIVLQLLLNRRHSWEVSGGLS
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=32.4137931034483, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=30.2521008403361, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=28.4046692607004, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787080, Length=263, Percent_Identity=25.8555133079848, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34869; Mature: 34738
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHH WDMFTPPVFVGLANFQNLFTSDPLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKG CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFRTIVFLPLAISSVVMAVVWQFIFNTHNGLLNIMLGWIGIGPIPWLVNPGWAMASLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCHHHHHHH IVSVWRSVPFATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVIS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FIHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALALVTFAILLVLI HHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQLLLNRRHSWEVSGGLS HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSFQK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHH WDMFTPPVFVGLANFQNLFTSDPLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQKVKG CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFRTIVFLPLAISSVVMAVVWQFIFNTHNGLLNIMLGWIGIGPIPWLVNPGWAMASLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCHHHHHHH IVSVWRSVPFATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVIS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FIHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALALVTFAILLVLI HHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQLLLNRRHSWEVSGGLS HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]