| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is glbO
Identifier: 221230117
GI number: 221230117
Start: 1498175
End: 1498561
Strand: Reverse
Name: glbO
Synonym: MLBr_01253
Alternate gene names: 221230117
Gene position: 1498561-1498175 (Counterclockwise)
Preceding gene: 221230141
Following gene: 221230109
Centisome position: 45.85
GC content: 59.17
Gene sequence:
>387_bases GTGCAGCAATCTTTCTACGACGCTATCGGCGGGGCCGAGACCTTCAAAGCGATTGTGTCACGCTTTTATGCGCAGGTTCC TGAAGATGAGATACTGCGTGAGTTGTATCCCGCAGACGACCTGGCCGGCGCCGAAGAACGATTGCGCATGTTCCTCGAGC AATACTGGGGTGGTCCGCGAACATACTCCAGTCAACGCGGCCATCCGCGGTTGCGTATGCGTCACGCTCCTTTCCGGATC ACTGCCATCGAGCGCGACGCTTGGCTGCGGTGCATGCACACCGCCGTCGCCTCCATCGACTCGCATACCCTCGACAACGA GCATCGACGGGAGTTGCTCGACTATTTGGAGATGGCCGCACACTCCCTCGTGAACTCCGCGTCTTGA
Upstream 100 bases:
>100_bases ATGCCATGTCGATCTGGTGAACACCAGGAACCACCTATTGGCTTAAGCCCACCTCCGGTTATCACCCAGGCGATACACCA CAATGGAAGAGATGGATCAG
Downstream 100 bases:
>100_bases TGTCGGGCCACGAGACCCAGCCGTGGTGGTCGACCGCGGTGTTCTACCAGTTCTATCCGCAGTCGTTCGCTGACAGCAAC GGCTACGGGGTGGGCAGCCT
Product: hemoglobin-like, oxygen carrier
Products: NA
Alternate protein names: Hemoglobin-like protein HbO; Truncated hemoglobin; TrHbO
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MQQSFYDAIGGAETFKAIVSRFYAQVPEDEILRELYPADDLAGAEERLRMFLEQYWGGPRTYSSQRGHPRLRMRHAPFRI TAIERDAWLRCMHTAVASIDSHTLDNEHRRELLDYLEMAAHSLVNSAS
Sequences:
>Translated_128_residues MQQSFYDAIGGAETFKAIVSRFYAQVPEDEILRELYPADDLAGAEERLRMFLEQYWGGPRTYSSQRGHPRLRMRHAPFRI TAIERDAWLRCMHTAVASIDSHTLDNEHRRELLDYLEMAAHSLVNSAS >Mature_128_residues MQQSFYDAIGGAETFKAIVSRFYAQVPEDEILRELYPADDLAGAEERLRMFLEQYWGGPRTYSSQRGHPRLRMRHAPFRI TAIERDAWLRCMHTAVASIDSHTLDNEHRRELLDYLEMAAHSLVNSAS
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the truncated hemoglobin family. Group II subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRHBO_MYCLE (Q9CC59)
Other databases:
- EMBL: AL583921 - PIR: G87065 - RefSeq: NP_301903.1 - ProteinModelPortal: Q9CC59 - SMR: Q9CC59 - EnsemblBacteria: EBMYCT00000029194 - GeneID: 910362 - GenomeReviews: AL450380_GR - KEGG: mle:ML1253 - Leproma: ML1253 - GeneTree: EBGT00050000015598 - HOGENOM: HBG537829 - OMA: PDARDRW - ProtClustDB: CLSK791868 - BioCyc: MLEP272631:ML1253-MONOMER - InterPro: IPR012292 - InterPro: IPR009050 - InterPro: IPR019795 - InterPro: IPR001486 - Gene3D: G3DSA:1.10.490.10
Pfam domain/function: PF01152 Bac_globin; SSF46458 Globin_like
EC number: NA
Molecular weight: Translated: 14829; Mature: 14829
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS01213 GLOBIN_FAM_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSFYDAIGGAETFKAIVSRFYAQVPEDEILRELYPADDLAGAEERLRMFLEQYWGGPR CCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC TYSSQRGHPRLRMRHAPFRITAIERDAWLRCMHTAVASIDSHTLDNEHRRELLDYLEMAA CCCCCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HSLVNSAS HHHHHCCC >Mature Secondary Structure MQQSFYDAIGGAETFKAIVSRFYAQVPEDEILRELYPADDLAGAEERLRMFLEQYWGGPR CCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC TYSSQRGHPRLRMRHAPFRITAIERDAWLRCMHTAVASIDSHTLDNEHRRELLDYLEMAA CCCCCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HSLVNSAS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002