| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is lprE
Identifier: 221230019
GI number: 221230019
Start: 1270197
End: 1270805
Strand: Reverse
Name: lprE
Synonym: MLBr_01099
Alternate gene names: 221230019
Gene position: 1270805-1270197 (Counterclockwise)
Preceding gene: 221230021
Following gene: 221230018
Centisome position: 38.89
GC content: 60.59
Gene sequence:
>609_bases GTGCGCGATGTGTGGTCACTACCCTGTCGCAAGTCACTACTGGGCGTGGCAGCTGTCGTGTTGGTCTCCGGGACATTAAC CGGCTGTAGTTCCGGGGACTCCACGGTTGCAAAGACGCCAGTGCCCCCCTCTACCACCACCGGGACCATTTCAACCATCA TCTCCAGTGCACCGAGCCCGCCATTCGCAACAGCTGCCCCGCCCACCAGCAACACACCACCGGACGATCCGTGCGCGGTC AATCTTGCCTCACCCACAATCGCCAGGGTGGTCTCTGAGCTGCCCCGCGATCCGCGCAGTGCGCAGCCCTGGAATCCAGA ACCATTGGCCGGTAATTACAACGAGTGCGCTCAGCTATCGGCGGTGATCATTAAGGCCAACACGAACGCGGTCAACCCCA CCACCCGGGCTGTGCTGTTTCATCTTGGCCGATTCATCCCGCAAGGTGTTCCTGACACCTACGGGTTCAACGGCATTGAC CCAGCGCAAACCACTGGCGACACGGTGGCGTTGACATACCCTAGCAGCATTGACGGCTTAGCCACCGCTGTGAGGTTCCA TTGGAACGGCAACGCGGTAGAGCTCATCAGTAACATCGCCGGCGGCTAG
Upstream 100 bases:
>100_bases CTGGACGCAGCGAATGCCTGGGTCGCGAGCGATCGTGTTCGTACCGTGACACGCTGCATCAGCAGTACAACTGCGAACGT TTACGACGGCAGGCGGTACC
Downstream 100 bases:
>100_bases CCAAGCGGCACTCCGTTACCGTCCGAACCCTCTCACCTACAGTTGTTGCTGTGTTCGTCACCGACGAGACCATCGTCTAC AGTGCGTCGGATCTCGCCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTVAKTPVPPSTTTGTISTIISSAPSPPFATAAPPTSNTPPDDPCAV NLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLSAVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGID PAQTTGDTVALTYPSSIDGLATAVRFHWNGNAVELISNIAGG
Sequences:
>Translated_202_residues MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTVAKTPVPPSTTTGTISTIISSAPSPPFATAAPPTSNTPPDDPCAV NLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLSAVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGID PAQTTGDTVALTYPSSIDGLATAVRFHWNGNAVELISNIAGG >Mature_202_residues MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTVAKTPVPPSTTTGTISTIISSAPSPPFATAAPPTSNTPPDDPCAV NLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLSAVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGID PAQTTGDTVALTYPSSIDGLATAVRFHWNGNAVELISNIAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPRE_MYCLE (Q9CC94)
Other databases:
- EMBL: AL583920 - PIR: E87046 - RefSeq: NP_301805.1 - EnsemblBacteria: EBMYCT00000029142 - GeneID: 910190 - GenomeReviews: AL450380_GR - KEGG: mle:ML1099 - NMPDR: fig|272631.1.peg.677 - Leproma: ML1099 - GeneTree: EBGT00050000016623 - HOGENOM: HBG569097 - OMA: HQGKFIP - ProtClustDB: CLSK791050 - BioCyc: MLEP272631:ML1099-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20806; Mature: 20806
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTVAKTPVPPSTTTGTISTIISSAPSP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCC PFATAAPPTSNTPPDDPCAVNLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLS CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEE AVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGIDPAQTTGDTVALTYPSSIDGL EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ATAVRFHWNGNAVELISNIAGG EEEEEEEECCCHHHHHHHHCCC >Mature Secondary Structure MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTVAKTPVPPSTTTGTISTIISSAPSP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCC PFATAAPPTSNTPPDDPCAVNLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLS CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEE AVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGIDPAQTTGDTVALTYPSSIDGL EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ATAVRFHWNGNAVELISNIAGG EEEEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002