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The map label for this gene is ybaK [H]

Identifier: 221229826

GI number: 221229826

Start: 949061

End: 949468

Strand: Reverse

Name: ybaK [H]

Synonym: MLBr_00799

Alternate gene names: 221229826

Gene position: 949468-949061 (Counterclockwise)

Preceding gene: 221229829

Following gene: 221229825

Centisome position: 29.05

GC content: 61.03

Gene sequence:

>408_bases
TTGCAATTCGACACCGTTAACAACCTATCTCGCAATACCCTGACACCGCGTCTGAGCAGGTATTCAAAAACACTGATTAT
CGCGCTACCTCGCGAGCTAGCCATCGCGATACTGTCGGCACCGTCCCGATTGTCGCTGAAGGAGACTGCCGCGGCGCCCG
GTGTGACCAAAGCCAACACGGCCGAACCCGCTGCCGCTCAGCGGGCTACTAGCTATGTCGTCGGCGGGGTCTTCCCTTCT
GGTCAGTGGAAGCGGTTGCGGACGGTTGTGGACACCTCAGCGTTGAGCTGGGACCGGGTGCTTTGCAACGCCGGTAAGCG
GCATCGACTCCTTGCGCCAGGATGCCGAGGCGAACCAGGTTATGTTCGGCATCCATCCGGCTGGCGATCGGCCGAGCGGT
GCTGGTGA

Upstream 100 bases:

>100_bases
AACCGGCCGGGCTACCCCCAGCCCTAAGCATATGAACGCTACTAGATTTGCAGCCCCAGGACCCGTAGCACTGATACAAG
CCATCTTACTACACGAGATC

Downstream 100 bases:

>100_bases
GCAAGCAGGTCCAGCAGTGCGGCGAGCCCGTCTGGCTCGATGGCTGGATTCGGGATTTCGGGAACTCCCTAGGGGAATAT
ATATATATATATATATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQFDTVNNLSRNTLTPRLSRYSKTLIIALPRELAIAILSAPSRLSLKETAAAPGVTKANTAEPAAAQRATSYVVGGVFPS
GQWKRLRTVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPGYVRHPSGWRSAERCW

Sequences:

>Translated_135_residues
MQFDTVNNLSRNTLTPRLSRYSKTLIIALPRELAIAILSAPSRLSLKETAAAPGVTKANTAEPAAAQRATSYVVGGVFPS
GQWKRLRTVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPGYVRHPSGWRSAERCW
>Mature_135_residues
MQFDTVNNLSRNTLTPRLSRYSKTLIIALPRELAIAILSAPSRLSLKETAAAPGVTKANTAEPAAAQRATSYVVGGVFPS
GQWKRLRTVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPGYVRHPSGWRSAERCW

Specific function: Functions in trans to edit the amino acid from incorrectly charged Cys-tRNA(Pro); has much weaker activity against Ala-tRNA(Pro). Probably compensates for the lack of Cys- tRNA(Pro) editing by ProRS. Additionally serves as a general deacylase with weak ac

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786688, Length=88, Percent_Identity=40.9090909090909, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 14772; Mature: 14772

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFDTVNNLSRNTLTPRLSRYSKTLIIALPRELAIAILSAPSRLSLKETAAAPGVTKANT
CCCCCCCCCCCCCCCHHHHHCCCEEEEEECHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
AEPAAAQRATSYVVGGVFPSGQWKRLRTVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPG
CCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEECCCCCCCCC
YVRHPSGWRSAERCW
EEECCCCCCCCCCCC
>Mature Secondary Structure
MQFDTVNNLSRNTLTPRLSRYSKTLIIALPRELAIAILSAPSRLSLKETAAAPGVTKANT
CCCCCCCCCCCCCCCHHHHHCCCEEEEEECHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
AEPAAAQRATSYVVGGVFPSGQWKRLRTVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPG
CCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEECCCCCCCCC
YVRHPSGWRSAERCW
EEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10813833 [H]