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The map label for this gene is ybeY [C]

Identifier: 221229736

GI number: 221229736

Start: 761203

End: 761739

Strand: Direct

Name: ybeY [C]

Synonym: MLBr_00628

Alternate gene names: 221229736

Gene position: 761203-761739 (Clockwise)

Preceding gene: 221229735

Following gene: 221229737

Centisome position: 23.29

GC content: 57.54

Gene sequence:

>537_bases
ATGAGTGTTGAAGTATCTAACGAGTCAGGCTTCGACGTTTCTGAAGTGGAACTGGTTAGCGTCGCGCGGTTTGTCATCAT
CAAAATGGACGTCAACCCAGCAGCAGAGCTGTCGATGGTGCTACTGGACACCGCAGCGATGGCCGATCTACATATGCGCT
GGATGGACCTTCCTGGGCCAACGGACGTAATGAGCTTCCCGATGGACGAGTTCGAACCGGGTGGTCGACCTGACGCCGCT
GAGCCAGGGCCCTCCATGTTGGGTGACATTGTGCTGTGCCCAGAGTTCGCCGCGCAGCAGGCGGCCGCAGAGGGCCACAG
CCTCGGACATGAGTTAGCGCTGCTGACAATTCACGGCGTACTTCACCTGCTCGGCTACGACCACGGTGAGCCAGACGAGG
AGAAGGAGATGTTCGCCCTGCAGGGCAGGTTACTGGAAGAGTGGGTGGCCGAACAGGTACGGGCCTATCAGCATGACCGT
CAGAACGAGAAAGACTGTCGATTGCTGTACAAGTCAGGGTATTTCGGCTACTTGTGA

Upstream 100 bases:

>100_bases
ATATGAGGAGCACGACTTGGGGATGAATCGGGCGGCTCGGCGAGCGTCCGGCGCTCGCAATCGTCGATGATGGTGGCGTG
GATAGTCCCATGAGCATCTT

Downstream 100 bases:

>100_bases
CCGGCCTGAATCAGTTGATCGGCGTGATCGCGTTGATTGGACTGGGTGGGTTGTTTGCTGCCGATCGACGCCGCCATTAG
CACCGTGTCGCTGGCTCGGG

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSVEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAA
EPGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEEWVAEQVRAYQHDR
QNEKDCRLLYKSGYFGYL

Sequences:

>Translated_178_residues
MSVEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAA
EPGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEEWVAEQVRAYQHDR
QNEKDCRLLYKSGYFGYL
>Mature_177_residues
SVEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAAE
PGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEEWVAEQVRAYQHDRQ
NEKDCRLLYKSGYFGYL

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Escherichia coli, GI1786880, Length=94, Percent_Identity=36.1702127659575, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_MYCLB (B8ZUT0)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002503152.1
- ProteinModelPortal:   B8ZUT0
- SMR:   B8ZUT0
- EnsemblBacteria:   EBMYCT00000086747
- GeneID:   7327392
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000016997
- HOGENOM:   HBG734136
- OMA:   MDVHPAA
- ProtClustDB:   PRK00016
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 19751; Mature: 19619

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGP
CEEECCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDVMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHGEPDEEKEMFALQGRLLEEWVAEQVRAYQHDRQNEKDCRLLYKSGYFGYL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGP
EEECCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDVMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHGEPDEEKEMFALQGRLLEEWVAEQVRAYQHDRQNEKDCRLLYKSGYFGYL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA