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The map label for this gene is dedA [C]

Identifier: 221229629

GI number: 221229629

Start: 564592

End: 565236

Strand: Direct

Name: dedA [C]

Synonym: MLBr_00467

Alternate gene names: 221229629

Gene position: 564592-565236 (Clockwise)

Preceding gene: 221229628

Following gene: 221229632

Centisome position: 17.28

GC content: 60.16

Gene sequence:

>645_bases
ATGGACGTGGATGCTCTGCTGCAGTCAATACCACCACTTGCAGTCTACCTGCTGGTCAGCGGTGTGGTCGGGGTCGAGAG
TTTGGGCATTCCCCTACCGGGAGAGGTCGTGCTGGTAAGTGCGGCGCTGTTGTCGTCGCGTCACGACCTGGCGGTCAGCT
CGATCGGTGTCGGTGTCGTCGCTGTGATTGGCGCCGCAGTCGGCGACTCGATCGGCTACGCTATTGGCCGCCGATTTGGC
ATGCCGCTCTTTGATCACCTTGGCCGGCGGTTTCCGAAGCACTTCGGTCCGGGGCATGTCGCGTTGGTCGAGCGGTTGTT
TAATCGCTGGGGTGTGCGGGCGGTCTTCTTTGGTCGTTTTATCGCGTTGCTGCGCATACTCGCCGGGCCGCTGGCGGGAG
CGTTGAAAATGCACTACCCGCGCTTTCTAGCTGCCAACGTATCGGGTGCCATTTGTTGGGCAGGCGGTACTACCGCGCTG
GTCTACTTCGCCGGGATGGCCGCCGAACGCTGGATGGAACGATTCTCTTGGATCGCGCTCATCATCACCGTGGTGGTCGG
CATCATCGCCGCAATCTTGCTGCGCGAACGAACGTCACGGATAATTGCCGAACTTGAGATGGAGTATAAAAACCGCCGGC
ACTAA

Upstream 100 bases:

>100_bases
GCGGTTAGAACCTGTTAGCGCGTCACACGTAGAACACCACGACGCGCCAACTTGACGCTAAGAGCCTGCGGCGCGCATCC
CGGTCGGGCATTCTTGATGT

Downstream 100 bases:

>100_bases
ACCTAACCGCCCCTAATTCCGTTTGACGCCTGCCGTGAGGGGAGCTAGCTCGCCGGGCTGGGTTTGGCCATCAGTCATCG
TGCCGTTGTTCGTCTCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDVDALLQSIPPLAVYLLVSGVVGVESLGIPLPGEVVLVSAALLSSRHDLAVSSIGVGVVAVIGAAVGDSIGYAIGRRFG
MPLFDHLGRRFPKHFGPGHVALVERLFNRWGVRAVFFGRFIALLRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTAL
VYFAGMAAERWMERFSWIALIITVVVGIIAAILLRERTSRIIAELEMEYKNRRH

Sequences:

>Translated_214_residues
MDVDALLQSIPPLAVYLLVSGVVGVESLGIPLPGEVVLVSAALLSSRHDLAVSSIGVGVVAVIGAAVGDSIGYAIGRRFG
MPLFDHLGRRFPKHFGPGHVALVERLFNRWGVRAVFFGRFIALLRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTAL
VYFAGMAAERWMERFSWIALIITVVVGIIAAILLRERTSRIIAELEMEYKNRRH
>Mature_214_residues
MDVDALLQSIPPLAVYLLVSGVVGVESLGIPLPGEVVLVSAALLSSRHDLAVSSIGVGVVAVIGAAVGDSIGYAIGRRFG
MPLFDHLGRRFPKHFGPGHVALVERLFNRWGVRAVFFGRFIALLRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTAL
VYFAGMAAERWMERFSWIALIITVVVGIIAAILLRERTSRIIAELEMEYKNRRH

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family

Homologues:

Organism=Escherichia coli, GI1788656, Length=134, Percent_Identity=31.3432835820896, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y467_MYCLE (Q49642)

Other databases:

- EMBL:   U00011
- EMBL:   U00011
- EMBL:   Z96801
- EMBL:   AL583918
- PIR:   C86967
- PIR:   S72719
- PIR:   S72727
- RefSeq:   NP_301414.1
- EnsemblBacteria:   EBMYCT00000029036
- GeneID:   909213
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML0467
- NMPDR:   fig|272631.1.peg.286
- Leproma:   ML0467
- GeneTree:   EBGT00050000017505
- HOGENOM:   HBG657460
- OMA:   RFLTANV
- ProtClustDB:   CLSK791971
- BioCyc:   MLEP272631:ML0467-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 23115; Mature: 23115

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22b0c09c)-; HASH(0x2205234c)-; HASH(0x220e9e8c)-; HASH(0x228896fc)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVDALLQSIPPLAVYLLVSGVVGVESLGIPLPGEVVLVSAALLSSRHDLAVSSIGVGVV
CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AVIGAAVGDSIGYAIGRRFGMPLFDHLGRRFPKHFGPGHVALVERLFNRWGVRAVFFGRF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHH
IALLRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTALVYFAGMAAERWMERFSWIAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IITVVVGIIAAILLRERTSRIIAELEMEYKNRRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MDVDALLQSIPPLAVYLLVSGVVGVESLGIPLPGEVVLVSAALLSSRHDLAVSSIGVGVV
CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AVIGAAVGDSIGYAIGRRFGMPLFDHLGRRFPKHFGPGHVALVERLFNRWGVRAVFFGRF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHH
IALLRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTALVYFAGMAAERWMERFSWIAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IITVVVGIIAAILLRERTSRIIAELEMEYKNRRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002