Definition Mycobacterium leprae Br4923 chromosome, complete genome.
Accession NC_011896
Length 3,268,071

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The map label for this gene is sra [H]

Identifier: 221229606

GI number: 221229606

Start: 508764

End: 509990

Strand: Direct

Name: sra [H]

Synonym: MLBr_00411

Alternate gene names: 221229606

Gene position: 508764-509990 (Clockwise)

Preceding gene: 221229605

Following gene: 221229608

Centisome position: 15.57

GC content: 55.66

Gene sequence:

>1227_bases
ATGTTCGACTTCATGGTGTATTCGCCCGAGGTCAATGCTTTTCTTATGAGTCGTGGCCCGGGTTCTACTCCTCTATGGGG
CGCCGCTGAGGCATGGATTAGTCTGGCAGAGCAGTTAATGGAGGCGGCGCAGGAAGTGTCGGACACAATAGTCGTCGCGG
TGCCGGCGTCATTTGCGGGCGAGACGTCGGATATGTTAGCCAGCCGTGTCAGCACTTTTGTGGCGTGGCTGAATGGTAAC
GCCGAGAATGCCGGGCTGATTGCTCGCGTCCTCCACGCAGTGGCATACGCCTTCGAGGAGGCGCGTGCGGGCATGGTGCC
ACTGCTGACGGTGCTCGGGAACATCATACACACCATGGCGCTGAAGGCAATAAACTGGTTCGGGCAAGTATCTACCACGG
TCGCGGCTTTGGAAGCCGACTACGATCTGATGTGGGTCCAAAACTCGACGGCAATGACGACCTATCGGGATACCGTGCTC
AGAGAAACGGGAAAAATGGAAAATTTTGAACCAGCACCGCAGTTGGTCTCTAGATATTGCATGGATCGGCGGGATTCCGT
TAATTCGTTTGATTCTTCGTCTTCGTCCGATTCACTTTACGAATCAATCGATAATCTGTATGACTCGGTGGCTCAGTCCG
AAGAACACGGATCGGACAGTATGTCCCAATCGTACAATACGTGTGGATCGGTCGCTCAGTCTGAATTGTGCGATTCGCCG
TTTGGCACCCCTTCTCAGAGCTCTCAGAGCAACGACCTTTCTGCTACGAGCCTTACACAGCAGTTGGGAGGCCTGGACAG
TATCATATCGAGTGCTAGTGCAAGTCTGCTTACAACGAACAGCATAAGCAGCTCGACGGCAAGTAGTATTATGCCTATAG
TGGCTTCTCAGGTTACAGAAACACTGGGTCGAAGTCAAGTGGCTGTGGAGAAAATGATACAGTCGATTAGCAGCACCGCG
GTGAGCGTGGATGTGGCGGCCAGTAAAGTGGTTGCCGGCGTAGGTCAGGCTGTGTCGGTTGGTGCTTTGCGGGTGCCGGA
AAATTGGGCCACGGCCAGTCAGCCGGTCATGGCGACGGCGCACTCAGTGCCGGCAGGCTGCAGCGCGATTACCACGGCAG
TAAGCGGGCCGCTGGAAGGGGTGACTCAGCCTGCTGAGGAAGTTCTCACGGCTTCCGTTGCCGGCGGCAGTGGGACTGGA
GGTCCGGCCTTCAACGAAGCGGTTTGA

Upstream 100 bases:

>100_bases
CCTCACTGTGGGGCATCGTATTGTGTGAAGTTTCTGGCGGTATCGGAGTGGCTACCGGCGAGTAGGAAGATTATAGAGAA
GATATAGAGGTAACAAAATC

Downstream 100 bases:

>100_bases
GCGTGAGTGAGGTTGGTTGAACAATTATCGAGGTGCTAGTTGGTCATAGTGTTAGCTTTTTTGATACGTGCATAAGACCA
TCCCGTCACACACCTCGTGT

Product: serine-rich antigen

Products: NA

Alternate protein names: 25L; 45 kDa protein [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN
AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL
RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP
FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA
VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG
GPAFNEAV

Sequences:

>Translated_408_residues
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN
AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL
RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP
FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA
VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG
GPAFNEAV
>Mature_408_residues
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN
AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL
RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP
FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA
VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG
GPAFNEAV

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022171
- InterPro:   IPR000030 [H]

Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 42444; Mature: 42444

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAG
CCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
ETSDMLASRVSTFVAWLNGNAENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYC
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTE
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH
TLGRSQVAVEKMIQSISSTAVSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHH
HSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV
CCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAG
CCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
ETSDMLASRVSTFVAWLNGNAENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYC
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTE
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH
TLGRSQVAVEKMIQSISSTAVSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHH
HSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV
CCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8478104; 7934845; 11234002 [H]