| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is sra [H]
Identifier: 221229606
GI number: 221229606
Start: 508764
End: 509990
Strand: Direct
Name: sra [H]
Synonym: MLBr_00411
Alternate gene names: 221229606
Gene position: 508764-509990 (Clockwise)
Preceding gene: 221229605
Following gene: 221229608
Centisome position: 15.57
GC content: 55.66
Gene sequence:
>1227_bases ATGTTCGACTTCATGGTGTATTCGCCCGAGGTCAATGCTTTTCTTATGAGTCGTGGCCCGGGTTCTACTCCTCTATGGGG CGCCGCTGAGGCATGGATTAGTCTGGCAGAGCAGTTAATGGAGGCGGCGCAGGAAGTGTCGGACACAATAGTCGTCGCGG TGCCGGCGTCATTTGCGGGCGAGACGTCGGATATGTTAGCCAGCCGTGTCAGCACTTTTGTGGCGTGGCTGAATGGTAAC GCCGAGAATGCCGGGCTGATTGCTCGCGTCCTCCACGCAGTGGCATACGCCTTCGAGGAGGCGCGTGCGGGCATGGTGCC ACTGCTGACGGTGCTCGGGAACATCATACACACCATGGCGCTGAAGGCAATAAACTGGTTCGGGCAAGTATCTACCACGG TCGCGGCTTTGGAAGCCGACTACGATCTGATGTGGGTCCAAAACTCGACGGCAATGACGACCTATCGGGATACCGTGCTC AGAGAAACGGGAAAAATGGAAAATTTTGAACCAGCACCGCAGTTGGTCTCTAGATATTGCATGGATCGGCGGGATTCCGT TAATTCGTTTGATTCTTCGTCTTCGTCCGATTCACTTTACGAATCAATCGATAATCTGTATGACTCGGTGGCTCAGTCCG AAGAACACGGATCGGACAGTATGTCCCAATCGTACAATACGTGTGGATCGGTCGCTCAGTCTGAATTGTGCGATTCGCCG TTTGGCACCCCTTCTCAGAGCTCTCAGAGCAACGACCTTTCTGCTACGAGCCTTACACAGCAGTTGGGAGGCCTGGACAG TATCATATCGAGTGCTAGTGCAAGTCTGCTTACAACGAACAGCATAAGCAGCTCGACGGCAAGTAGTATTATGCCTATAG TGGCTTCTCAGGTTACAGAAACACTGGGTCGAAGTCAAGTGGCTGTGGAGAAAATGATACAGTCGATTAGCAGCACCGCG GTGAGCGTGGATGTGGCGGCCAGTAAAGTGGTTGCCGGCGTAGGTCAGGCTGTGTCGGTTGGTGCTTTGCGGGTGCCGGA AAATTGGGCCACGGCCAGTCAGCCGGTCATGGCGACGGCGCACTCAGTGCCGGCAGGCTGCAGCGCGATTACCACGGCAG TAAGCGGGCCGCTGGAAGGGGTGACTCAGCCTGCTGAGGAAGTTCTCACGGCTTCCGTTGCCGGCGGCAGTGGGACTGGA GGTCCGGCCTTCAACGAAGCGGTTTGA
Upstream 100 bases:
>100_bases CCTCACTGTGGGGCATCGTATTGTGTGAAGTTTCTGGCGGTATCGGAGTGGCTACCGGCGAGTAGGAAGATTATAGAGAA GATATAGAGGTAACAAAATC
Downstream 100 bases:
>100_bases GCGTGAGTGAGGTTGGTTGAACAATTATCGAGGTGCTAGTTGGTCATAGTGTTAGCTTTTTTGATACGTGCATAAGACCA TCCCGTCACACACCTCGTGT
Product: serine-rich antigen
Products: NA
Alternate protein names: 25L; 45 kDa protein [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG GPAFNEAV
Sequences:
>Translated_408_residues MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG GPAFNEAV >Mature_408_residues MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGN AENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVL RETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTA VSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTG GPAFNEAV
Specific function: Unknown
COG id: COG5651
COG function: function code N; PPE-repeat proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022171 - InterPro: IPR000030 [H]
Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 42444; Mature: 42444
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAG CCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC ETSDMLASRVSTFVAWLNGNAENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMA CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYC HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTE CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH TLGRSQVAVEKMIQSISSTAVSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHH HSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV CCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAG CCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC ETSDMLASRVSTFVAWLNGNAENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMA CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LKAINWFGQVSTTVAALEADYDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYC HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSYNTCGSVAQSELCDSP HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTNSISSSTASSIMPIVASQVTE CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH TLGRSQVAVEKMIQSISSTAVSVDVAASKVVAGVGQAVSVGALRVPENWATASQPVMATA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHH HSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV CCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8478104; 7934845; 11234002 [H]